Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi304g00044 ATGAAACCGTTGATTAACTTCAGAACCTTGATCACCACTCTCCTATACTTTTCCATCTCCCTCTTTACTCTTCAAGCCTACGACCCAATTGACCGTTACACCCTCAATTGTGGCACAACAGGAAACTCTACCGACGGAGAAAGAACATGGACAGGAGACACAAACTCAAAACTTTTGTTATCATCACAAAACAACAACCCAACAACAATTTCTGTTCCAACAACAACACAAAAACCTTCCATCAACAAAATCCCTTATTCAACAGCTCGTTTATCACACTCAATATTCAACTACTCTTTCCCAGTCACTCAAGGTCCTAAGTTCCTCCGTCTTTTTTTCTACCCTTCTACCTATTCCAACGGTTTCAACCGTTACGATGCTTCCTTCACCATGGTATCTAACGGATTCACACTTCTTAAGGATTTTAATGCTTCGTTAAACGCTGATGTTGAAGGCGTTGATACTTTATTCAAGGAATATGCTATCAACGTTGGTGATGACCAAAGACTTGATTTGAGTTTTATTCCAAGTAGTAGAAATTCTAATAACTATGCTTTCATTAATGGAATTGAAGTCTTATCTATGCCTGATGATCTCTATTATAGATCATCCACTGATCCTAGTTTTTCACTTGTGGACTCCACTATCACTGCATATAGTATTTCAACCAACGTTGCACTTGAGACAGATTACAGGATCAATGTTGGAGTGCAAGCAAACTCACCAAATGTTCAAGACACAGACATGCTCAGAAACTGGAATGAAACCGACATAGACTATTTAAGAACGCCAACATCACGAGATTTTTCCTTTGGAGACATAAGAGGCACAAATAACATCACTGTAAACCCTGATTACATGGCACCCAAAGACATCTACAGAACATCACGTGACTTGGGCACCAATGCCACTCTCAACAAACTCTTGAACCTAACTTGGGAGTTCCCAGTTGATTATGGTTTCTATTACTTGATCAGGCTCCATTTCTGTGAACTCGACCCCAGCATAACTATCGTAGGTGATAGAGTCTTCATCATCTATTTACAAGGAAACGTGGCGGAAGATCATGCTGATGTTATGAAATGGACCCAAGATCAAAAAGGTCTTGCTGTACAAAGAAACTACGCCGTATACATTCCAAAGAGTAATAATAACGGTAACAAGAAAGCTAGCCTCTCTCTTCAATTGCATCCATATGCTGATCGTAGAGACACCATATACAGCGACCCTTTTTTAAATGGACTTGAGATTTTCAAAATCAGTGATGTGCATTCAAAGAATCTGGCTGGACCTAACCCGGATCCGCTTCAAAATCCGAATAAACCGCAAAAGAAAAAAAACATAAGTGGAACGACAATAATCGGCGTCATTTTGGGAGTTGTTTTTGGCGTATTTTCACTCTCTGTTGTCGTTTATTTCGTTTTTAGGAAGAAAAGAGAAACTAAAGGGAAAACCAAAACTCAAAACTTACATCTACCTTCGGGACTCTGCCGCAATTTTTCCATTGCCGAGATGCGTGCCGCCACGAACAACTTCAACAAGCTCTTCATCATCGGCGTAGGAGGATTTGGTCATGTGTACAAAGGGTACATTGACAACGGTTCAACAACTGTTGCAATCAAAAGACTAAAACCGGGTTCACAGCAAGGAGAAAACGAGTTCATCAACGAGATCGATTTGCTCTCAAACCTCCGTCACATACACCTCGTTTCTTTAATTGGTTATTGCAACGACAACAACGAAATGATTATAGTATACGATTTCATGACACGTGGAACTTTACAAGAACATCTCTACAACACAGACAATCCAGAATTATCATGGAAACAGCGGTTGAAGATTTCAATAGGTGCGGCCCGTGGTTTACGTTACCTTCATTCAGGTACGAAACACCCGATCATTCACCGTGACGTCAAAACGACAAATATTCTGTTAGATGAGAGATGGACAGCGAAGGTTTGTGATTTTGGTCTTTCACGATTTGGGCCTACGGGTATATCAAAGACCCATGTTAGCACTGTTGTTAAAGGTAGCATTGGTTACTTAGATCCTGAGTATTACAGACGACATCGTTTAACAGAGAAATCTGACGTGTATTCTTTTGGAGTTGTTTTATTTGAGATACTCTGCGCTCGACCCCCTATTATTAGAAGCGTGGAGCTGAATCAGGAGTCACTCGCCGATTGGGGAAAGTATTGTTATAAAAGTGGGATCATCGAGAGTATCGTGGATCCTTCTATAAAGGGCAGTATAACGCCCGAGTGTTTGGAAAAATTCGGTGAAATCGCGGCTAGCTGTTTGTTGGATGATGGAACTATGAGACCGTCGATGAACGACGTCGTTTGGATGTTGGAATTTGCTTTGCAGTTACAAGAGAATGCGGAACAACCTGAGCATCTTGTTGTTGGAAATGATGACGTGGAAGATGGTGGAAGAACGGACGTTAATGATGTATTATTTAGTGGGATCAATTCAGGAAATGTTTCGGATTTTAATAAGAGTGTTGATGTGAATTTAGATGATAGATATTAG 2532 0.4048 MKPLINFRTLITTLLYFSISLFTLQAYDPIDRYTLNCGTTGNSTDGERTWTGDTNSKLLLSSQNNNPTTISVPTTTQKPSINKIPYSTARLSHSIFNYSFPVTQGPKFLRLFFYPSTYSNGFNRYDASFTMVSNGFTLLKDFNASLNADVEGVDTLFKEYAINVGDDQRLDLSFIPSSRNSNNYAFINGIEVLSMPDDLYYRSSTDPSFSLVDSTITAYSISTNVALETDYRINVGVQANSPNVQDTDMLRNWNETDIDYLRTPTSRDFSFGDIRGTNNITVNPDYMAPKDIYRTSRDLGTNATLNKLLNLTWEFPVDYGFYYLIRLHFCELDPSITIVGDRVFIIYLQGNVAEDHADVMKWTQDQKGLAVQRNYAVYIPKSNNNGNKKASLSLQLHPYADRRDTIYSDPFLNGLEIFKISDVHSKNLAGPNPDPLQNPNKPQKKKNISGTTIIGVILGVVFGVFSLSVVVYFVFRKKRETKGKTKTQNLHLPSGLCRNFSIAEMRAATNNFNKLFIIGVGGFGHVYKGYIDNGSTTVAIKRLKPGSQQGENEFINEIDLLSNLRHIHLVSLIGYCNDNNEMIIVYDFMTRGTLQEHLYNTDNPELSWKQRLKISIGAARGLRYLHSGTKHPIIHRDVKTTNILLDERWTAKVCDFGLSRFGPTGISKTHVSTVVKGSIGYLDPEYYRRHRLTEKSDVYSFGVVLFEILCARPPIIRSVELNQESLADWGKYCYKSGIIESIVDPSIKGSITPECLEKFGEIAASCLLDDGTMRPSMNDVVWMLEFALQLQENAEQPEHLVVGNDDVEDGGRTDVNDVLFSGINSGNVSDFNKSVDVNLDDRY 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi304g00044 843 FunFam Receptor-like protein kinase FERONIA 589 805 - -
Vivi304g00044 843 SMART serkin_6 512 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi304g00044 843 Gene3D - 32 196 - -
Vivi304g00044 843 Gene3D - 226 421 - -
Vivi304g00044 843 SUPERFAMILY Protein kinase-like (PK-like) 498 786 IPR011009 -
Vivi304g00044 843 ProSitePatterns Protein kinases ATP-binding region signature. 518 541 IPR017441 GO:0005524
Vivi304g00044 843 Pfam Protein tyrosine and serine/threonine kinase 518 782 IPR001245 GO:0004672|GO:0006468
Vivi304g00044 843 Pfam Malectin-like domain 35 420 IPR024788 -
Vivi304g00044 843 CDD STKc_IRAK 518 785 - -
Vivi304g00044 843 FunFam receptor-like protein kinase FERONIA 475 588 - -
Vivi304g00044 843 Gene3D Phosphorylase Kinase; domain 1 472 588 - -
Vivi304g00044 843 ProSiteProfiles Protein kinase domain profile. 512 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi304g00044 843 Gene3D Transferase(Phosphotransferase) domain 1 589 807 - -
Vivi304g00044 843 FunFam FERONIA receptor-like kinase 32 196 - -
Vivi304g00044 843 PANTHER OS03G0124300 PROTEIN-RELATED 7 486 IPR046957 GO:0004672
Vivi304g00044 843 ProSitePatterns Serine/Threonine protein kinases active-site signature. 633 645 IPR008271 GO:0004672|GO:0006468
Vivi304g00044 843 FunFam FERONIA receptor-like kinase 225 421 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi304g00044 18 842 Receptor kinase-like Gene Family AT3G51550 46.469 0.0 703
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Vivi304g00044 Malectin_like 1.2e-31 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi304g00044 - - vvo:131630062 1392.1