Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi304g00042 ATGGAGAATGAAAACCCTTCCTCATCCTCATCAAAATCGCCATTTCCAACTACCGAACAAGAAATAGCTTATCGGCCGGAACCGGAACCTGAACCTGAAACAGTAAGGACATATGACGTGTTCTTAAGTTTCAGAGGAAAAGATACTCGCGCCTCTTTCACTTCACATCTCCATACTGCTCTTCAGAATGCCGGAATTACTGTTTTTATTGACGATAATGACCTTCAAAGAGGAGATCACATTTCAACATCATTATCACTAGTAATTGAGCGCTGTCAAGTTTCTATAATTGTTTTCTCTATAAATTATGCTGATTCGCGATGGTGTCTCGATGAATTGGAAAAAATAATGGTGTGTCGCAGAAGCAACAGACAAGTGGTTGTGCCAGTGTTCTACCATATAGATCCCTCTCAAGTGCGGAGTCAGTCAGGCCAGTTTGGAATAGCTTTTCAACGTCTTTTGAACAAAATAGAAAAGGAGGTCGATTTCGATTTATATCATGAAAGGCAAATGAGGTGGAGAATGACACTTCTTCACGCAGCTAATATCGCAGGGTTCGTGATACTAAACAGGAATGAAAGTGAGGATATCAAAAGAATTGTTGACAAAGTTTCACATTTGTTAAACAAGACAGACTTGTTTATTGCACATAATCCTGTGGGAATTGAATCTCGAGTGCAAGATGTCATTCAACTTCTATCCATTCAATCAAATGGAGTTCTACTTCTAGGGATGTGGGGCATGGGGGGAATTGGCAAAACAACAATTGCAAAAGCAATTTACAATAAAATTGGCCGTGATTTTGAAGGTAGGAGCTTCCTTGCTAATATTAGGGAAAATGGGGAGAAAATTGCCGGACTAGTGGGTTTACAAGAGCAACTTCTATTTGATATCTTCAAAGAAACGACAATCAAGATACCAAACATTCAATCAGGAATAAACACATTACAATCTAAACTCGGTCAGAAAAAAGTACTTATTGTACTTGATGATGTGAATACGTTAGACCAACTAAAAACTTTTTGTGGAAGTCATGAATGGTTTGGTTCAGGAAGTATAATAATCATCACTACTAGAGATATGCATTTACTTACAGGGAGAGTCGACAATATATACAAAATGTCAATAATGAATGAAGCTGAATCAATTGAGCTTTTTAGTTGGAATGCATTTAAGCAAGCAAGTCCTACAGGAGATTTTGTTACAATTTCCAAAAATGTAGTTGAATATTCTGGAGGATTGCCGCTAGCTCTTGAAGTCCTTGGGTCAAATTTGTTTAATAAGACGAAATTGGATTGGGAACTTGTATTGGAGAAACTCAAAAGAATTCCTAATAGTCAAGTCTATAAGAAGTTAAAAATAAGTTATGATTGTTTAAATGACGATGATGAGCAAGAAATATTCCTTGACATAGCTTGTTTCTTTATTGGGATGGACCGAAGTGACGTTATACTTATATTAAATGACTGCGGACTTTCTGCAGAAATTGGAATAAACATCCTTGTTGAGCGTAGCCTTGTGACTGTTGATAATAAGAACATGATTGGAATGCATGATTTACTGCGAGATATGGGAAGAGAAATCATTCGCGAGGAATCACCAAGGGTGCCTCAAAAGCGTAGCAGGTTGTGGTTTCAGGAGGATGTGATTGACATATTATCAAGACACAGGGAAAAAAAAGGTGTTATCGGACTTGCTTTGAAGCTGACTAGTGCAAATGCAAAAAGTTTTAGCACCAAAGCATTTCATAAGATGAAAAGGCTCAGATTGCTTCAACTTGTTGAGGTAAAACTTGATGGAGATTTTGAATATGTTTCAAGAGATCTGAGATGGTTGTCATGGAATGGATTACGTCACATACCTACAAATTTCTATCGAGAAAATTTGGTTTCCATCGAGTTAAAGAATAATAATGTCGATCTTCGATGGAATAAGACTATGAGGATGGAGAAGCTAAAAATTCTCAATCTAAGTCATTCTCACCGTCTCACACAAAGCCCTGACTTTTCAAACATGCCTAATCTTGAAAAGATAGTACTCAAAGATTGTTCAATGCTGTGTAAGCTTTCTTCTAGCATTGGACATCTCAATAAAATTCTTCTGATAGATTTAGAAGACTGCATTAGACTATGTAGCCTTCCAAGAAGCATCTATAAGTTGAAATCTCTGAAAATTCTCAATCTTTCGGGTTGTTTGAAGATTGAAAATATGGAAGAGGAAGATAAGGTCCAAAACACTGCAATAACAAGAGTGCCCTTTTCCGTGATAAGATCCAAAAGCATTGGATATATTTCTTTGTGCGGTTATGGAGAATTTTCACGTGATTTGTTTCCATCTATCCTTTGGTCTTGGATGTCACCAACAAATAATCTCTCGTCGCGATTTCAGACAAATGCTGCCACATCATCTCTTGTTACTCTAGATGTACCAAGTAGTAGTTCCCGTGAAGCATCATCGTTTTCTTACCATCTTCCATGGATTCGAAGTATTTGGATGGATTGCAAATCTGAAGATCAGCTTTCCTTACATTCAAAAATAGTTTTGGATGCTTTATATGCCACAGGTTCTAAGGATTTGGAATCAACTGCAAGTACATCACAAGCATCAAATAGTACTACTCCCACAGTAATTCAATGTTGTAGTCAAATGCACGTTTCAGGATCAAAACATTACTTAAAGTCTCATTTAATTCAAATGGAGTGCCAAGCCACTAATATTCAGAAAGAGAAAATTTTACAGATTCTATGTTGCAGTCAAGTGCACGTTTCAGGATCAAAACATTACTTTAAGTCTCTTTTGATTCAAATGGGAATGAATTGCCAAGTCACCAATATTCTGAAAGAGAAAGTTCTACAGAATATGGATGTCAATGGGAGTGGTGGTTGTTTTCTCCCTGGTGATAGTTATCCAAATTGGTTAACCTTTAATTCTGAAGATTCTTCTGTAACTTTTCAAGTGCCTCATGTGAAAGGGCATAACTTGAATGCAGTGATGTGCATTGTCTATACTTCCACCCCAGTTGACATAGCATCCGATGGCCTTAAAATGGTGTTAGTGAAAAATTACACAAAGGCTACCATTCAACTTTATAAGAGAGAAACATTAGTTTCCCTTGAAGATGAAGAGGGGCAGAGGATAGTATCAAGTATGGAACCAGGTAACAAAGTGGAGGTCGTCGTTGTTTTTGAGAATAGTTTCATTGTGAAGAAGACATCAGTTTACCTCATATATGATGGACCAGTTGACGAAAAATTGGATCTATATCATGTACCTGATTTGAGAGGCATTGCTTGTAGTGGTGATGAAAATGAACACTCTGTCAAGAGAATCTCTACTGAAGAAGAGTCCATCGATGACTTCAATCGAAACAGAAAGAAGAAGAATCGACTGGAATGA 3396 0.3716 MENENPSSSSSKSPFPTTEQEIAYRPEPEPEPETVRTYDVFLSFRGKDTRASFTSHLHTALQNAGITVFIDDNDLQRGDHISTSLSLVIERCQVSIIVFSINYADSRWCLDELEKIMVCRRSNRQVVVPVFYHIDPSQVRSQSGQFGIAFQRLLNKIEKEVDFDLYHERQMRWRMTLLHAANIAGFVILNRNESEDIKRIVDKVSHLLNKTDLFIAHNPVGIESRVQDVIQLLSIQSNGVLLLGMWGMGGIGKTTIAKAIYNKIGRDFEGRSFLANIRENGEKIAGLVGLQEQLLFDIFKETTIKIPNIQSGINTLQSKLGQKKVLIVLDDVNTLDQLKTFCGSHEWFGSGSIIIITTRDMHLLTGRVDNIYKMSIMNEAESIELFSWNAFKQASPTGDFVTISKNVVEYSGGLPLALEVLGSNLFNKTKLDWELVLEKLKRIPNSQVYKKLKISYDCLNDDDEQEIFLDIACFFIGMDRSDVILILNDCGLSAEIGINILVERSLVTVDNKNMIGMHDLLRDMGREIIREESPRVPQKRSRLWFQEDVIDILSRHREKKGVIGLALKLTSANAKSFSTKAFHKMKRLRLLQLVEVKLDGDFEYVSRDLRWLSWNGLRHIPTNFYRENLVSIELKNNNVDLRWNKTMRMEKLKILNLSHSHRLTQSPDFSNMPNLEKIVLKDCSMLCKLSSSIGHLNKILLIDLEDCIRLCSLPRSIYKLKSLKILNLSGCLKIENMEEEDKVQNTAITRVPFSVIRSKSIGYISLCGYGEFSRDLFPSILWSWMSPTNNLSSRFQTNAATSSLVTLDVPSSSSREASSFSYHLPWIRSIWMDCKSEDQLSLHSKIVLDALYATGSKDLESTASTSQASNSTTPTVIQCCSQMHVSGSKHYLKSHLIQMECQATNIQKEKILQILCCSQVHVSGSKHYFKSLLIQMGMNCQVTNILKEKVLQNMDVNGSGGCFLPGDSYPNWLTFNSEDSSVTFQVPHVKGHNLNAVMCIVYTSTPVDIASDGLKMVLVKNYTKATIQLYKRETLVSLEDEEGQRIVSSMEPGNKVEVVVVFENSFIVKKTSVYLIYDGPVDEKLDLYHVPDLRGIACSGDENEHSVKRISTEEESIDDFNRNRKKKNRLE 1131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi304g00042 1131 ProSiteProfiles TIR domain profile. 36 208 IPR000157 GO:0007165
Vivi304g00042 1131 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 207 471 IPR027417 -
Vivi304g00042 1131 Pfam NB-ARC domain 223 446 IPR002182 GO:0043531
Vivi304g00042 1131 SMART till_3 37 183 IPR000157 GO:0007165
Vivi304g00042 1131 SUPERFAMILY Toll/Interleukin receptor TIR domain 36 186 IPR035897 -
Vivi304g00042 1131 Gene3D Ribonuclease Inhibitor 565 750 IPR032675 -
Vivi304g00042 1131 FunFam Disease resistance protein (TIR-NBS-LRR class) 34 210 - -
Vivi304g00042 1131 Gene3D - 376 460 IPR042197 -
Vivi304g00042 1131 MobiDBLite consensus disorder prediction 1 33 - -
Vivi304g00042 1131 Pfam TIR domain 38 209 IPR000157 GO:0007165
Vivi304g00042 1131 SUPERFAMILY L domain-like 517 826 - -
Vivi304g00042 1131 MobiDBLite consensus disorder prediction 1 18 - -
Vivi304g00042 1131 Gene3D - 216 371 IPR027417 -
Vivi304g00042 1131 PRINTS Disease resistance protein signature 319 333 - -
Vivi304g00042 1131 PRINTS Disease resistance protein signature 242 257 - -
Vivi304g00042 1131 PRINTS Disease resistance protein signature 411 425 - -
Vivi304g00042 1131 PRINTS Disease resistance protein signature 718 734 - -
Vivi304g00042 1131 Gene3D - 33 215 IPR035897 -
Vivi304g00042 1131 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 38 768 IPR044974 GO:0006952
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi304g00042 28 755 WRKY Transcription Factor Family AT4G12020 30.423 3.06e-83 296