Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi304g00041 ATGCATTTCTCCAATGACTTACCCCAAGACGCGGAAATAATTTCATTTGATGAAGATGATACAGTAAAAATCCAACCAAGGATCCATGATGTGTTTCTAAGCTTCAGAGGCGAAGATACACGTTCTTCCTTCACTTCACATCTCTACGCTTCTCTTCAAAACGCCGGAATTGATGTTTTTAAGGACGATCATTCACTTCAAAGAGGAGACACCATTTCATCTTCACTCATTCAAGCAATCGAAGGTTCTCGCATTTCTATTATCGTTTTTTCAATCAATTACGCCGGATCGCGATGGTGTCTTCTAGAGTTGGTGAAAATAATGGAGTGTCACAGAACCACGGGCCAAATTGTTCTACCGGTGTTCTACGGTGTTGATCCATCTGAAGTTCGTCATCAGAGAGGTGAATTTGGAAAAGCGTATAGTGATCTTTTGGATAAGATTTCAATTGAGGAGAATGAAGATGATGAATTGCTGGATTTAGAATTGAGGATAGGTTCTGTAAACTCGCTTCGTCAATATCCAGAGCTTCATGAGGCCGCTAGCCTGTCTGGCTTCGTGGTCCTAAATTCCAGGAATGAAAGTGAGGCCATCAAGGATATTGTTGAAAATGTTACACGTTTGCTTGACAAGACAGACCTATTTATTGCTAATAATCCAGTGGGTGTTGAATCTCGAGTGGAAGATATGATTCAATTGTTAGAACAAGATATCCAACAATCAAATGACGTTCTCTTATTAGGGATGTGGGGTATGGGAGGAGTTGGTAAAACTACCATTGCCAAAGCCATTTATAATAAAATTGGCCGCAATTTTGATGGTAGAAGCTTCCTTGCAAATATTAGGGAAGTTTGGGAGGCTGGTGTTGGTCAAGTGAATTTACAAGAACAACTTCTCTCTGATATTTGCAAAGAAATGACAACCAAGATACAAAGCATTGAAAAAGGAAAAATCATATTACAGGATAGACTCTGCCATAAAAGAATACTAATTGTACTTGATGATGTTAATACATTGGACCAACTCAATGCCTTGTGTGGAAGTCATAAATGGTTTGGTTCGGGGAGTAGAATAATTATCACAACAAGAGATAGACATATACTTCGTGGGAATAGGGTTAATCAAGTATATGAAATGAAGAATATGGATGAAAGGGAATCAATTGAGCTATTTAGTTGGCATGCATTCAAGCAAGCAAGTCCTACAAAAGATTTTGTTGGAATTTCCAAAAATGTAGTTGAGTATTCTGGGGGATTGCCATTGGCTCTGGAAGTCCTTGGGTCATATTTGTTTGATAGGGCGGTAACTGAATGGCATTCTGTTTTGGAGAAACTCAAAAGAATTCCTAATGACCAAGTACAAAAGAAGTTAAAAATAAGCTATGATGGTTTAAATGATGACACCGAGAAAGAAATATTTCTTGACATAGCTTGTTTCTTTATTGGGATGGACCGAAACGATGTTATGCTTGTACTAAATGGCTGTGGACTTTTTGCAGAAATTGGAATAAGTATTCTTATTGAGCGAAGCCTTGTAATTGTTGATGATAGGAACAAGCTTGGAATGCATGATTTGCTGCGAGATATGGGAAGAGAAATCATTCGTGAGGAATCACCAAGGGTGCTTGAAAAGCGTAGCAGGTTGTGGTTTCATGATGATGTGCATGAAGTATTATCAGACCAATCTGGAACAAAAGCTATCAAGGGGCTGGCTTTGAAGTTACCAAGAATTGATGCAAAGTGTTTTAGTACTAATGCATTTAAGAAGATGACGCAACTCAGATTACTTCAACTTGCTGGAGTGAAACTTGATGGAGATTTTGAATATCTTTCAACAAAACTGAGGTGGCTATCTTGGAACAAATTTCCTTTAACACGTATACCTACAAACTTTTGTCGAGGAAATTTGGTTTCCATCGAGTTAGAGAGCAGCAATATCAAAATTCTGTGGAAAGAGGCCCAGATGATGGGAAATCTTAAAATTCTCAACCTTAGCCATTCACATTATTTGACACACACTCCTGACTTTTCATACATGCCTAATCTTGAAAAGCTAGTACTCAAGGATTGCCCAATGTTGTCTGAGGTTTCTCCTAGCATTGGACATCTCAATGAAATTCTTTTGATAAATTTGGAAGATTGCATTAGCCTTTCTAGCCTCCCAAGAAGCATCTATAAGTTGAAATCTTTGAAAACTCTCATTCTTTCTGGTTGTATAAAGATTGACAAGTTGGAAGAGGATTTGGAACAAATGGAATCTTTAACCACCCTACTTGCAAATAACACTGCAATAACAAGAGTGCCCTTTTCAGTGGTAAGGTCCAAAAGCATTGGATATATTTCTCTGTGCGGCTATCAAGGATTTTCACGTGATGTGTTTCCATCTATCGTTTGGTCTTGGATGTCACCATCAAATAATCTCCCATCTCAATTTCAAACATCTGCTGCCACGTCATCCCTTGTTTCTTTTGATGTACCAAGTAGTAGTTCACATGAACTATCGTCTTTTTCTTACCACCTTCCTAGGCTTCGAAGTCTTTGGGTGGATTGCAACTCTGAAGACCAACTTTCTCTAGATGCTAAAATAATTTTGGATGCTTTATATGCTACAGTTTCTAAGGAATTTGAATCAACTGCAACTACATCACAAGTATCAAATATGACTACTTCTACATTGATTCAATACAGCAGTCAAGTGCAGGTTTTGGGTTCAAAACATTCCTTAAAGTCTCTTTTAATTCAAATGGGAATGGATTGCCAAGTCACCAATATTCTCAAAGAGAAAATTTTACAGAATATGGATGCCAATGGGAGTGGTGGTTGTTTGTTCCCTGATGATAGTTATCCAGATTGGTTAACCTTTAATTCCGAAGGTTCTTCGGTAACTTTTAAAGTCCCTCAAGTGGAAGGGCGTAACTTGAAGACAATGATGTGTATTGTCTATACTTCCACCCCAGATAACATAACAACAGATGGCCTTAAAAATGTGTTGGTGAACAATTTCACAAAGGCCACCATTCAGCTCTATAAGAGAGAAGCATTACTCTCCTTTAAAGATGAAGAGAGCCAGAGAGTAATATCAAGTTTAGAACCCGGTAACAAAGTGGAGGTGGTTGTTGTTTTCGAGAACAGTTTCATTGTGAAGAAGATAGCGGTTTATCTTGTATTCGATAAACCAATTGGTAAAACTATTGATCTATATCAATTACCAGATTTGAATGTCATTGCTTGTAGTGAGGATAAAAATGAATGCTCTATCAAGAGATTTCTTACTCAAGAAGAGCCCACAGATGACTTCAATCAAAACAGAAAGAAGAAAAATCGAATGGAATGA 3333 0.378 MHFSNDLPQDAEIISFDEDDTVKIQPRIHDVFLSFRGEDTRSSFTSHLYASLQNAGIDVFKDDHSLQRGDTISSSLIQAIEGSRISIIVFSINYAGSRWCLLELVKIMECHRTTGQIVLPVFYGVDPSEVRHQRGEFGKAYSDLLDKISIEENEDDELLDLELRIGSVNSLRQYPELHEAASLSGFVVLNSRNESEAIKDIVENVTRLLDKTDLFIANNPVGVESRVEDMIQLLEQDIQQSNDVLLLGMWGMGGVGKTTIAKAIYNKIGRNFDGRSFLANIREVWEAGVGQVNLQEQLLSDICKEMTTKIQSIEKGKIILQDRLCHKRILIVLDDVNTLDQLNALCGSHKWFGSGSRIIITTRDRHILRGNRVNQVYEMKNMDERESIELFSWHAFKQASPTKDFVGISKNVVEYSGGLPLALEVLGSYLFDRAVTEWHSVLEKLKRIPNDQVQKKLKISYDGLNDDTEKEIFLDIACFFIGMDRNDVMLVLNGCGLFAEIGISILIERSLVIVDDRNKLGMHDLLRDMGREIIREESPRVLEKRSRLWFHDDVHEVLSDQSGTKAIKGLALKLPRIDAKCFSTNAFKKMTQLRLLQLAGVKLDGDFEYLSTKLRWLSWNKFPLTRIPTNFCRGNLVSIELESSNIKILWKEAQMMGNLKILNLSHSHYLTHTPDFSYMPNLEKLVLKDCPMLSEVSPSIGHLNEILLINLEDCISLSSLPRSIYKLKSLKTLILSGCIKIDKLEEDLEQMESLTTLLANNTAITRVPFSVVRSKSIGYISLCGYQGFSRDVFPSIVWSWMSPSNNLPSQFQTSAATSSLVSFDVPSSSSHELSSFSYHLPRLRSLWVDCNSEDQLSLDAKIILDALYATVSKEFESTATTSQVSNMTTSTLIQYSSQVQVLGSKHSLKSLLIQMGMDCQVTNILKEKILQNMDANGSGGCLFPDDSYPDWLTFNSEGSSVTFKVPQVEGRNLKTMMCIVYTSTPDNITTDGLKNVLVNNFTKATIQLYKREALLSFKDEESQRVISSLEPGNKVEVVVVFENSFIVKKIAVYLVFDKPIGKTIDLYQLPDLNVIACSEDKNECSIKRFLTQEEPTDDFNQNRKKKNRME 1110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi304g00041 1110 Gene3D Ribonuclease Inhibitor 566 935 IPR032675 -
Vivi304g00041 1110 Gene3D - 214 376 IPR027417 -
Vivi304g00041 1110 ProSiteProfiles TIR domain profile. 27 209 IPR000157 GO:0007165
Vivi304g00041 1110 Coils Coil 741 761 - -
Vivi304g00041 1110 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 29 859 IPR044974 GO:0006952
Vivi304g00041 1110 SUPERFAMILY Toll/Interleukin receptor TIR domain 25 142 IPR035897 -
Vivi304g00041 1110 FunFam Disease resistance protein (TIR-NBS-LRR class) 25 211 - -
Vivi304g00041 1110 Gene3D - 381 465 IPR042197 -
Vivi304g00041 1110 SUPERFAMILY L domain-like 537 856 - -
Vivi304g00041 1110 SUPERFAMILY "Winged helix" DNA-binding domain 452 558 IPR036390 -
Vivi304g00041 1110 Pfam NB-ARC domain 227 461 IPR002182 GO:0043531
Vivi304g00041 1110 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 209 476 IPR027417 -
Vivi304g00041 1110 Pfam TIR domain 29 146 IPR000157 GO:0007165
Vivi304g00041 1110 Gene3D - 24 213 IPR035897 -
Vivi304g00041 1110 SMART AAA_5 243 383 IPR003593 GO:0016887
Vivi304g00041 1110 PRINTS Disease resistance protein signature 725 741 - -
Vivi304g00041 1110 PRINTS Disease resistance protein signature 246 261 - -
Vivi304g00041 1110 PRINTS Disease resistance protein signature 323 337 - -
Vivi304g00041 1110 PRINTS Disease resistance protein signature 416 430 - -
Vivi304g00041 1110 SMART till_3 28 168 IPR000157 GO:0007165
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi304g00041 29 771 WRKY Transcription Factor Family AT4G12020 31.496 3.69e-87 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi304g00041 - - tpra:123910008 1599.72