Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi304g00036 ATGGAATGGAATGAAATCCATACCACTCCTTTCCGCTCCGCTCCATCCGTTTTTAAATTATCCAAACAACGGAATATCATTTTATTCCATTCCGTTCTGCTCCGCTCCATCCGATTCCATCAATCCAAACAAAGCCTGAGAGAAAAAAACACAGATGCATCTTTCACTTCAATTCTCCATGAATCTATTCAACAGCTTGGATCTCTCATTTCAGAACTCACTTCTTCGCTTCAAGAGGACGTCGATAGAGAGATTCATTCACATGAAAATTTTATGAGTTTGATAAGAAAAAGAGCGTGTGCATCTCCAGACTTTGAATCTCTCATTTCAGAATACACACCTGCAACTACCACTTCACTTCTCCATGCTTCTCTTCAAAAACTTGAATCTCTCATTTCACATCTCACTGCTTCTCTTAAAAAGGTCAGGTTTGACGTTAATACAGAGATCCGTGAACATGAAGTGTTGTTAGCAAAAATCACATGTCTATCTTTCACTTCACATTTCCATGAATGTATTCTATACCTTGAATCTCTCATTTCAGAACTCACTTCTTCTTTTCAAGTAGAAGGGATTGACGTTAATAGAGTGATCAACGAACATGAAGTGTTCTTAAGTTTCAGAGGAGATGACACGCGTGCATCTTTCACTTCACATCTCCATGCTTCTCTTCAAAACGATGGAATCTCCGTTTTCATGGACGATGATTCGCTTCAAAGAGGAAATCACATTTCAGCATCACTACTACGAGCTATTGAAAACTCTCAGATCTCTGTGATTGTTTTTTCAAGAAATTATGCTGATTCAAGATGGTGTTTGGAAGAATTGGTGAAAATAATCCAGTGTCGCAGAACTGTAGGAAAGGTGGTGCTTCCGGTGTTCTATGGTGTAGATCCATCTGAAGTTCGTCACCAAACTGGTGAGTTTGGACAAGCATTTCAAAGGCTTTTGAATAGGACTTCAAAGGACAAAAAATATAAGTCTCTCAAATGGAGAAAAGCACTCCGTGAAGCTGCCGGCCTTGCTGGTTTCGTAGTTCTAAATTCAAGGAATGAAAGGGAGGCTATCAACGATATTGTCGAAAAAGTTACTCTTTTGCTTGACAAGACACAATTGTTTGTTGCTGATAATCCAGTGGGAGTTGAATCACGGGTGAAAGATATAATTCAACAGCTAGACATCCAACAATCAAATAATGTTCTACTCCTAGGGATGTGGGGTATGGGGGGAACCGGTAAAACCACCATTGCAAAAGCCATTTACAACAAAATTGGCCGCAATTTCGAAGGCAGGAGTTTCCTTGTAAATATTAGAGAAACCTGGGAAGGTACTACTGGAAAAGTGTCTTTACAAGAACGACTTCTGTTAGATATCTTCAAAGAAACAAAAACCAAGATACAAAGCATTGAGTCTGGGAAAACTACATTGAAAGATAGACTCTGTAATAAAAGAGTACTTCTCATACTTGATGATGTGAATATTTTGGACCAACTAAAAGCTTTGTGTGGAAGTCGTGAATGGTTTGGTTCTGGTAGTAGAATAATAATCACAACTAGAGATAAACATATACTTAGAGGGATAAGAGTTGACAAAGTATACACAATGAAAGAAATGGATGAAAATGAATCAATTGAGTTTTTTAGTTTGAATGCATTCAAGCAACCTAGTCCTAGAAAACAATTTGCTGAAATTTCTAGAAAAATTGTTGAGTACTGTGGGGGATTGCCACTAGCTCTGGAAGTCCTTGGTTCCTATTTGTTTGACAGGGGACTAACAGATTGGAAGTGTGTATTGGAGAAAATCAAAATAATTCCCAATGATCAAGTACAACAGAAGTTAAAAATCAGCTATGATGGTTTAAATGATGATACTGAGAAAGAAATATTTCTTGACATAGCTTGTTTCTTTATTGGGATGGACCGAAATGATGTTATACAAATATTAAATCCCTGTGGACTTTTTGCAGAAATTGGAATAAGTGTGCTTGTTGAGCGAAGCCTGATAACTGTTGATGATAAGAACAAGCTTAGAATGCATGATTTGTTACGAGATATGGGAAGAGAAATCATTCGTGAAAAATCACCGAAGGAGCCTGAGGAACGTAGCATATTATGGTTTCGCGAGGATGTGCTTGGTGTTTTATTTGATCAAAATGGAACAAAAGCTGTTGAGGGACTAGCTTTGAAGTTGCCAATAGCTAATTCAAAATGTTTTAGCACTAAAGCGTTTAAGAAGATGAAGAGACTCAGATTGCTTCAACTTGTTGGTGTACAACTCGATGGAGATTTTGAATATCTTTCAAGAAATTTAAGATGGCTATGTTGGAATGGATTTCCTTTAACATGCATACCTTCAAACTTTTATCAAGGAAACTTAGTTTCCATGGAGTTAGAAAACAGCAATATGAAATTTGTGTGGAAAGAGACCCCGAGAATGGAGATGCTGAAAATCCTAAACCTTAGTCATTCCCATCAACTGATGCAGACCCCAAACTTCTCAAATTTGCCTAATCTTGAAAAGCTAATACTTGTAGATTGTCCAATGTTATCTGAGGTTTCCAACAGCATTGGAGATCTCAATAAAATTCTTCTAATAAATTTGGAAGACTGTATTTGCCTATGTAACCTTCCAAGAAGCATTTATAAGTTGACATCTCTTAAAACTCTAATTCTTTCAGGGTGTTTAATGATTGACACGTTGGAAGAAGACATAGAAAAAATGGAATCTTTGACCACTCTGATTGCAAATAACACTGGAATAACAAGAGTTCCGTTTTCTATAGTCAGATCAAAAAGTATCGGCTACATTTCTTTGTGCGGCTATGAGGGTTTCTCAAGGGATGTATTTCCAGCTATCATTTCGTCTTGGATATCTCCAACAAATAATTTTACACCCCAATTTCAAACATCTACTATTATGTCTTCTCTTATTTCTTTAGATGTACCACATAGTAGTTCCCAGGAGCTATCATCGATTTCTAAGTACCTTCCAAGTCTTAGAAGTCTTTGGGTGGAGTGTAGCTCGGAGGATCAACTTTCTCATGATACAACAATAATTTTAGAGGCATTATATGCCCTAAATTCTCGAGAATTGGAACCAACATCTTCCACATCACAAGTATCAAAAAATTCCTTTAAATCTCTTTTCATTCAACTGGGAAGGAATTGCCAAGTTGCCAATATTCTGAAAGAGAAAGTTTTACAGTATATGTCCGGTGACGAGAGTGGTGGTTGTGTGCTCCTGGGTGATAGTTATCCCGATTGGTTAAGCTTCAATTGTGATGGTTCTGCCGTAATTTTTAAAGTCCCTCAAGTAGAAGGGCGTAACTTGAAGTCATTGATCTGCATTGCCTATTCATCAACTCCTGATAACATAACATCGGATGGTCTTAAAAATGTGTTGGTGAAAAATTACACGAAAGCCACCATTCAGCTCTATAGGAAAGAGACACTTGCTTCCTTTACAGACGAGGAGGGGGAGAGAGTAGTATCAAGTATAGAACCCAGAGACAAAGTGGAAGTTGTTGTTGTTTTTGAAAATGGTTTCAGTGTGAAGAAAACTACAGTTTATCTCGTATATGATGAACCAATGGGAGAAAAAAGTGAACAATGGGAAGCACCAGAACAAAATACTATTGCTTGTAGGGCTGATGAAAATGAAAGCGTACAATGTGAAGAACCAGACGAAAATGCTAATGCTTATAGTGCTGATGAAAATGAAAGCATATTAAGGACGAGCTCTCCACAAGTGGAACTCGTGGAAAAAAATGTTGGTGCGAGTAGTTGTGGATCTGTCAAATATAGTTTTAGACAGTGGATTACAAATTTTATGTGTAGATTAGTGGAGTGCTGGGGATAG 3858 0.3751 MEWNEIHTTPFRSAPSVFKLSKQRNIILFHSVLLRSIRFHQSKQSLREKNTDASFTSILHESIQQLGSLISELTSSLQEDVDREIHSHENFMSLIRKRACASPDFESLISEYTPATTTSLLHASLQKLESLISHLTASLKKVRFDVNTEIREHEVLLAKITCLSFTSHFHECILYLESLISELTSSFQVEGIDVNRVINEHEVFLSFRGDDTRASFTSHLHASLQNDGISVFMDDDSLQRGNHISASLLRAIENSQISVIVFSRNYADSRWCLEELVKIIQCRRTVGKVVLPVFYGVDPSEVRHQTGEFGQAFQRLLNRTSKDKKYKSLKWRKALREAAGLAGFVVLNSRNEREAINDIVEKVTLLLDKTQLFVADNPVGVESRVKDIIQQLDIQQSNNVLLLGMWGMGGTGKTTIAKAIYNKIGRNFEGRSFLVNIRETWEGTTGKVSLQERLLLDIFKETKTKIQSIESGKTTLKDRLCNKRVLLILDDVNILDQLKALCGSREWFGSGSRIIITTRDKHILRGIRVDKVYTMKEMDENESIEFFSLNAFKQPSPRKQFAEISRKIVEYCGGLPLALEVLGSYLFDRGLTDWKCVLEKIKIIPNDQVQQKLKISYDGLNDDTEKEIFLDIACFFIGMDRNDVIQILNPCGLFAEIGISVLVERSLITVDDKNKLRMHDLLRDMGREIIREKSPKEPEERSILWFREDVLGVLFDQNGTKAVEGLALKLPIANSKCFSTKAFKKMKRLRLLQLVGVQLDGDFEYLSRNLRWLCWNGFPLTCIPSNFYQGNLVSMELENSNMKFVWKETPRMEMLKILNLSHSHQLMQTPNFSNLPNLEKLILVDCPMLSEVSNSIGDLNKILLINLEDCICLCNLPRSIYKLTSLKTLILSGCLMIDTLEEDIEKMESLTTLIANNTGITRVPFSIVRSKSIGYISLCGYEGFSRDVFPAIISSWISPTNNFTPQFQTSTIMSSLISLDVPHSSSQELSSISKYLPSLRSLWVECSSEDQLSHDTTIILEALYALNSRELEPTSSTSQVSKNSFKSLFIQLGRNCQVANILKEKVLQYMSGDESGGCVLLGDSYPDWLSFNCDGSAVIFKVPQVEGRNLKSLICIAYSSTPDNITSDGLKNVLVKNYTKATIQLYRKETLASFTDEEGERVVSSIEPRDKVEVVVVFENGFSVKKTTVYLVYDEPMGEKSEQWEAPEQNTIACRADENESVQCEEPDENANAYSADENESILRTSSPQVELVEKNVGASSCGSVKYSFRQWITNFMCRLVECWG 1285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi304g00036 1285 PRINTS Disease resistance protein signature 479 493 - -
Vivi304g00036 1285 PRINTS Disease resistance protein signature 881 897 - -
Vivi304g00036 1285 PRINTS Disease resistance protein signature 402 417 - -
Vivi304g00036 1285 PRINTS Disease resistance protein signature 572 586 - -
Vivi304g00036 1285 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 365 632 IPR027417 -
Vivi304g00036 1285 Gene3D - 537 621 IPR042197 -
Vivi304g00036 1285 SUPERFAMILY "Winged helix" DNA-binding domain 608 714 IPR036390 -
Vivi304g00036 1285 SUPERFAMILY Toll/Interleukin receptor TIR domain 200 344 IPR035897 -
Vivi304g00036 1285 ProSiteProfiles TIR domain profile. 199 367 IPR000157 GO:0007165
Vivi304g00036 1285 Gene3D Ribonuclease Inhibitor 727 1073 IPR032675 -
Vivi304g00036 1285 SMART till_3 200 341 IPR000157 GO:0007165
Vivi304g00036 1285 Pfam NB-ARC domain 382 602 IPR002182 GO:0043531
Vivi304g00036 1285 Pfam TIR domain 201 363 IPR000157 GO:0007165
Vivi304g00036 1285 SUPERFAMILY L domain-like 728 1057 - -
Vivi304g00036 1285 Gene3D - 198 364 IPR035897 -
Vivi304g00036 1285 FunFam Disease resistance protein (TIR-NBS-LRR class) 198 369 - -
Vivi304g00036 1285 Gene3D - 365 532 IPR027417 -
Vivi304g00036 1285 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 201 1029 IPR044974 GO:0006952
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi304g00036 200 1002 WRKY Transcription Factor Family AT4G12020 30.389 9.89e-83 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi304g00036 - - tpra:123910008 1643.63