Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi304g00035 ATGAGTTTGATAAGAAAAAGAGCGTGTGCATCTCCAGACTTTGAATCTCTCATTTCAGAATACACACCTGCAACTACCACTTCACTTCTCCATGCTTCTCTTCAAAAACTTGAATCTCTCATTTCACATCTCACTGCTTCTCTTAAAAAGGTCAGGTTTGACGTTAATACAGAGATCCGTGAACATGAAGTGTTGTTAGCAAAAATCACATGTCTATCTTTCACTTCACATTTCCATGAATGTATTCTATACCTTGAATCTCTCATTTCAGAACTCACTTCTTCTTTTCAAGTAGAAGGGATTGACGTTAATAGAGTGATCAACGAACATGAAGTGTTCTTAAGTTTCAGAGGAGATGACACGCGTGCATCTTTCACTTCACATCTCCATGCTTCTCTTCAAAACGATGGAATCTCCGTTTTCATGGACGATGATTCGCTTCAAAGAGGAAATCACATTTCAGCATCACTACTACGAGCTATTGAAAACTCTCAGATCTCTGTGATTGTTTTTTCAAGAAATTATGCTGATTCAAGATGGTGTTTGGAAGAATTGGTGAAAATAATCCAGTGTCGCAGAACTGTAGGAAAGGTGGTGCTTCCGGTGTTCTATGGTGTAGATCCATCTGAAGTTCGTCACCAAACTGGTGAGTTTGGACAAGCATTTCAAAGGCTTTTGAATAGGACTTCAAAGGACAAAAAATATAAGTCTCTCAAATGGAGAAAAGCACTCCGTGAAGCTGCCGGCCTTGCTGGTTTCGTAGTTCTAAATTCAAGGAATGAAAGGGAGGCTATCAACGATATTGTCGAAAAAGTTACTCTTTTGCTTGACAAGACACAATTGTTTGTTGCTGATAATCCAGTGGGAGTTGAATCACGGGTGAAAGATATAATTCAACAGCTAGACATCCAACAATCAAATAATGTTCTACTCCTAGGGATGTGGGGTATGGGGGGAACCGGTAAAACCACCATTGCAAAAGCCATTTACAACAAAATTGGCCGCAATTTCGAAGGCAGGAGTTTCCTTGTAAATATTAGAGAAACCTGGGAAGGTACTACTGGAAAAGTGTCTTTACAAGAACGACTTCTGTTAGATATCTTCAAAGAAACAAAAACCAAGATACAAAGCATTGAGTCTGGGAAAACTACATTGAAAGATAGACTCTGTAATAAAAGAGTACTTCTCATACTTGATGATGTGAATATTTTGGACCAACTAAAAGCTTTGTGTGGAAGTCGTGAATGGTTTGGTTCTGGTAGTAGAATAATAATCACAACTAGAGATAAACATATACTTAGAGGGATAAGAGTTGACAAAGTATACACAATGAAAGAAATGGATGAAAATGAATCAATTGAGTTTTTTAGTTTGAATGCATTCAAGCAACCTAGTCCTAGAAAACAATTTGCTGAAATTTCTAGAAAAATTGTTGAGTACTGTGGGGGATTGCCACTAGCTCTGGAAGTCCTTGGTTCCTATTTGTTTGACAGGGGACTAACAGATTGGAAGTGTGTATTGGAGAAAATCAAAATAATTCCCAATGATCAAGTACAACAGAAGTTAAAAATCAGCTATGATGGTTTAAATGATGATACTGAGAAAGAAATATTTCTTGACATAGCTTGTTTCTTTATTGGGATGGACCGAAATGATGTTATACAAATATTAAATCCCTGTGGACTTTTTGCAGAAATTGGAATAAGTGTGCTTGTTGAGCGAAGCCTGATAACTGTTGATGATAAGAACAAGCTTAGAATGCATGATTTGTTACGAGATATGGGAAGAGAAATCATTCGTGAAAAATCACCGAAGGAGCCTGAGGAACGTAGCATATTATGGTTTCGCGAGGATGTGCTTGGTGTTTTATTTGATCAAAATGGAACAAAAGCTGTTGAGGGACTAGCTTTGAAGTTGCCAATAGCTAATTCAAAATGTTTTAGCACTAAAGCGTTTAAGAAGATGAAGAGACTCAGATTGCTTCAACTTGTTGGTGTACAACTCGATGGAGATTTTGAATATCTTTCAAGAAATTTAAGATGGCTATGTTGGAATGGATTTCCTTTAACATGCATACCTTCAAACTTTTATCAAGGAAACTTAGTTTCCATGGAGTTAGAAAACAGCAATATGAAATTTGTGTGGAAAGAGACCCCGAGAATGGAGATGCTGAAAATCCTAAACCTTAGTCATTCCCATCAACTGATGCAGACCCCAAACTTCTCAAATTTGCCTAATCTTGAAAAGCTAATACTTGTAGATTGTCCAATGTTATCTGAGGTTTCCAACAGCATTGGAGATCTCAATAAAATTCTTCTAATAAATTTGGAAGACTGTATTTGCCTATGTAACCTTCCAAGAAGCATTTATAAGTTGACATCTCTTAAAACTCTAATTCTTTCAGGGTGTTTAATGATTGACACGTTGGAAGAAGACATAGAAAAAATGGAATCTTTGACCACTCTGATTGCAAATAACACTGGAATAACAAGAGTTCCGTTTTCTATAGTCAGATCAAAAAGTATCGGCTACATTTCTTTGTGCGGCTATGAGGGTTTCTCAAGGGATGTATTTCCAGCTATCATTTCGTCTTGGATATCTCCAACAAATAATTTTACACCCCAATTTCAAACATCTACTATTATGTCTTCTCTTATTTCTTTAGATGTACCACATAGTAGTTCCCAGGAGCTATCATCGATTTCTAAGTACCTTCCAAGTCTTAGAAGTCTTTGGGTGGAGTGTAGCTCGGAGGATCAACTTTCTCATGATACAACAATAATTTTAGAGGCATTATATGCCCTAAATTCTCGAGAATTGGAACCAACATCTTCCACATCACAAGTATCAAAAAATTCCTTTAAATCTCTTTTCATTCAACTGGGAAGGAATTGCCAAGTTGCCAATATTCTGAAAGAGAAAGTTTTACAGTATATGTCCGGTGACGAGAGTGGTGGTTGTGTGCTCCTGGGTGATAGTTATCCCGATTGGTTAAGCTTCAATTGTGATGGTTCTGCCGTAATTTTTAAAGTCCCTCAAGTAGAAGGGCGTAACTTGAAGTCATTGATCTGCATTGCCTATTCATCAACTCCTGATAACATAACATCGGATGGTCTTAAAAATGTGTTGGTGAAAAATTACACGAAAGCCACCATTCAGCTCTATAGGAAAGAGACACTTGCTTCCTTTACAGACGAGGAGGGGGAGAGAGTAGTATCAAGTATAGAACCCAGAGACAAAGTGGAAGTTGTTGTTGTTTTTGAAAATGGTTTCAGTGTGAAGAAAACTACAGTTTATCTCGTATATGATGAACCAATGGGAGAAAAAAGTGAACAATGGGAAGCACCAGAACAAAATACTATTGCTTGTAGGGCTGATGAAAATGAAAGCGTACAATGTGAAGAACCAGACGAAAATGCTAATGCTTATAGTGCTGATGAAAATGAAAGCATATTAAGGACGAGCTCTCCACAAGTGGAACTCGTGGAAAAAAATGTTGGTGCGAGTAGTTGTGGATCTGTCAAATATAGTTTTAGACAGTGGATTACAAATTTTATGTGTAGATTAGTGGAGTGCTGGGGATAG 3585 0.3735 MSLIRKRACASPDFESLISEYTPATTTSLLHASLQKLESLISHLTASLKKVRFDVNTEIREHEVLLAKITCLSFTSHFHECILYLESLISELTSSFQVEGIDVNRVINEHEVFLSFRGDDTRASFTSHLHASLQNDGISVFMDDDSLQRGNHISASLLRAIENSQISVIVFSRNYADSRWCLEELVKIIQCRRTVGKVVLPVFYGVDPSEVRHQTGEFGQAFQRLLNRTSKDKKYKSLKWRKALREAAGLAGFVVLNSRNEREAINDIVEKVTLLLDKTQLFVADNPVGVESRVKDIIQQLDIQQSNNVLLLGMWGMGGTGKTTIAKAIYNKIGRNFEGRSFLVNIRETWEGTTGKVSLQERLLLDIFKETKTKIQSIESGKTTLKDRLCNKRVLLILDDVNILDQLKALCGSREWFGSGSRIIITTRDKHILRGIRVDKVYTMKEMDENESIEFFSLNAFKQPSPRKQFAEISRKIVEYCGGLPLALEVLGSYLFDRGLTDWKCVLEKIKIIPNDQVQQKLKISYDGLNDDTEKEIFLDIACFFIGMDRNDVIQILNPCGLFAEIGISVLVERSLITVDDKNKLRMHDLLRDMGREIIREKSPKEPEERSILWFREDVLGVLFDQNGTKAVEGLALKLPIANSKCFSTKAFKKMKRLRLLQLVGVQLDGDFEYLSRNLRWLCWNGFPLTCIPSNFYQGNLVSMELENSNMKFVWKETPRMEMLKILNLSHSHQLMQTPNFSNLPNLEKLILVDCPMLSEVSNSIGDLNKILLINLEDCICLCNLPRSIYKLTSLKTLILSGCLMIDTLEEDIEKMESLTTLIANNTGITRVPFSIVRSKSIGYISLCGYEGFSRDVFPAIISSWISPTNNFTPQFQTSTIMSSLISLDVPHSSSQELSSISKYLPSLRSLWVECSSEDQLSHDTTIILEALYALNSRELEPTSSTSQVSKNSFKSLFIQLGRNCQVANILKEKVLQYMSGDESGGCVLLGDSYPDWLSFNCDGSAVIFKVPQVEGRNLKSLICIAYSSTPDNITSDGLKNVLVKNYTKATIQLYRKETLASFTDEEGERVVSSIEPRDKVEVVVVFENGFSVKKTTVYLVYDEPMGEKSEQWEAPEQNTIACRADENESVQCEEPDENANAYSADENESILRTSSPQVELVEKNVGASSCGSVKYSFRQWITNFMCRLVECWG 1194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi304g00035 1194 Gene3D - 446 530 IPR042197 -
Vivi304g00035 1194 FunFam Disease resistance protein (TIR-NBS-LRR class) 107 278 - -
Vivi304g00035 1194 Gene3D - 107 273 IPR035897 -
Vivi304g00035 1194 SUPERFAMILY Toll/Interleukin receptor TIR domain 109 253 IPR035897 -
Vivi304g00035 1194 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 274 541 IPR027417 -
Vivi304g00035 1194 SUPERFAMILY L domain-like 637 966 - -
Vivi304g00035 1194 SMART till_3 109 250 IPR000157 GO:0007165
Vivi304g00035 1194 Pfam TIR domain 110 272 IPR000157 GO:0007165
Vivi304g00035 1194 PRINTS Disease resistance protein signature 388 402 - -
Vivi304g00035 1194 PRINTS Disease resistance protein signature 790 806 - -
Vivi304g00035 1194 PRINTS Disease resistance protein signature 311 326 - -
Vivi304g00035 1194 PRINTS Disease resistance protein signature 481 495 - -
Vivi304g00035 1194 Gene3D Ribonuclease Inhibitor 636 982 IPR032675 -
Vivi304g00035 1194 Gene3D - 274 441 IPR027417 -
Vivi304g00035 1194 ProSiteProfiles TIR domain profile. 108 276 IPR000157 GO:0007165
Vivi304g00035 1194 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 110 939 IPR044974 GO:0006952
Vivi304g00035 1194 Pfam NB-ARC domain 291 511 IPR002182 GO:0043531
Vivi304g00035 1194 SUPERFAMILY "Winged helix" DNA-binding domain 517 623 IPR036390 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi304g00035 109 911 WRKY Transcription Factor Family AT4G12020 30.389 2.87e-83 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi304g00035 - - tpra:123910008 1643.63