Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi304g00032 ATGAAACCATTAATCAACTTCAAAACCATAATCACCACCCTGTTCTACTTTTCCATCTCCCTGTTTCCCCTTCAAGCCTACGACCCAGTTGACCGTTATACCCTCAATTGTGGCACAACAGGAAACTCTACCGACGGAGAAAGAACATGGACAGGAGACACAAACTCAAAACTTTTGTTATCATCACAAAACAACAACCCAACAACTATTTCTGTTCCAACAACAACACAAAAACCTTCCATCAACAAAATCCCTTATTCAACAGCTCGTTTATCACACTCAATATTCAACTACTCTTTCCCAGTCACTCAAGGTCCTAAGTTTCTCCGTCTTTTTTTCTACCCTTCTACCTATTCCAACGGTTTCAACCGTTACGATGCTTCCTTCACCGTGGTATCTAACGGATTCACACTTCTTAAGGATTTTAATGCTTCGTTAAACGCTGATGTTGAAGGTGTTGATACTTTATTCAAAGAATATGTAATCAACGTTGGGGATGATCAAAGGCTTGATTTGAGTTTTATCCCAAGTAGTGGAAATTCCAATAGCTATGCTTTCATTAATGGAATTGAAGTCTTATCCATGCCGGATGATCTCTATTATACATCATCCACTGATCCTGGTTTTTCACTTGTGGAGTCCACTATCATACCAGCATATACTATTTCAACCAACGTTGCCCTTGAGACAGATTACAGGATCAAAGTTGGAGTGCAAGCAAACTCACCAAAAATTCAAGACACAGGCATGCTTAGAAACTGGAACAAATACGACACAGATTATTTAAGAACTCCAACATCACGTGACTTTGTCTCTGGAGACTTAATAGGAAGGAACATCACTGTAAACCCCGATTATGTGGCACCCAAAGACCTCTACAGATCATCACGTGACTTGGGCACCAATGCCACTCTCAACCATCTCTTAAACCTAACTTGGGAGTTTCCACTTGATTCTGGTTTCTATTACTTCATCAGGCTCCACTTCTGTGAACTCGACCCCAACATAACTACCGTAGGTGATAGACTCTTCACCGTCTATTTACAAGGAAACGTAGCGGAAATTAGAGCTGATGTTATGAGATGGACCCAAGATCAAAAAGGGCTTGCTGTGCATAGAAACTACGCTGTTATCGTTCCAAAGAGTAATAATAAAGGTAACAAAAAAGTTAACCTCTCTATTCAAATGCAGCCATATGCTGATCGGAGAGAAACTGTTTACAGTGACCCGTTTTTAAATGGACTTGAGATTTTCAAAATCAGTGATGTGGGTTCAAAGAATCTAGCTGGACCCAACCCGGAACCGGTTCAAACTCCGGTTCAAGAGAAAAAGAAAAGCAAAAGCATAAGTGGAACGACAATACTTGGCGTCGTTTTGGGAGTTGTATTCGGCATCGTTTTGGTATCCCTTGTCGTTTTCTTTGTTTGTAGAAAAAAAAGACAAACGAAAGAAGAAAAGGCTACAACGACAAAAGACTCAAAGTCTTCAGCAACTTCGAAGTGGGGTCCACTGTCGTTTGCAACGACCAAGTCAAGCACTACACACAACTCAAATCTACCGTCAGATCTCTGCCGCAGCTTCTCGCTCGTCGAGATACGCGCCGCCACGAACAACTTCGACGAACTCTTCATCGTCGGCGTCGGAGGATTCGGCCATGTCTACAAAGGCTACCTCGACAACGGTTCAACACCGGTCGCGATCAAGCGTCTCAAACCGGGTTCACAGCAAGGAGAAAACGAGTTCATCAACGAGATCGACATGCTCTCAAACCTCCGTCACCTTCACCTCGTTTCTTTAATCGGTTACTGCAACGAGAACAACGAAATGATCATTGTCTACGATTTCATGATGCGTGGAACTTTACGCGATCATCTCTACAACACTGAGAACCCTGCTTTATCATGGAAACAGCGGTTGAAGATTTCAATAGGCGCGGCGCGTGGTTTACACTACCTTCATACAGGTGCGAAGCACACGATCATTCACCGTGACGTGAAAACAACGAATATTCTATTAGATGAGAAATGGATCGCAAAGGTTTCTGATTTTGGGCTTTCTCGAATTGGGCCTACGGGTGTAACTAAAGCCCATGTTAGCACTGTTGTGAAAGGTAGCGTTGGTTATTTAGATCCAGAGTATTACAAACGACAGCGTTTAACTGAGAAATCTGACGTGTACTCTTTTGGAGTGGTTTTATTTGAGATACTCTGCGCTCGGCCGCCTATTATCAGAACAGCGGAAAAGAAACAGGTGTCACTCGCTGATTGGGGAAGATTATGTTACAAAAGTGGGGCCCTCGGAAGTATCGTGGACCCTTCTGTGAAATGGAGTATAGCGCCGGAGTGTTTGAAAAAATTCGGAGAAATCGCTGTTAGTTGTTTGTTGGACGATGGAACGATGAGACCGTCGATGAACGACGTCGTATGGATGTTGGAATTTGCGTTGCAGTTACAAGAGAGTGCAGAACAACGTGACCGTGTTGTTGTGGATGGTGTTGTTGTTGGTGATGACGTGGAAGGTGGTGAAAGAAGAAATAAAAATGATGATGATGATGACGTGTTTAGTAGTAGTGGGAGCAATATTGGAAATGTTTCTGATTTTAATAAGAGTACTGAAGTGAGTGTGAGTACTATGACTGGTAGTAGTAGTGGTGAGAATAGCTATGGTTTTAATAAGGAAAGTGTTTTTTCTGAAATTGTGGATCCAAAAGCACGTTGA 2718 0.4253 MKPLINFKTIITTLFYFSISLFPLQAYDPVDRYTLNCGTTGNSTDGERTWTGDTNSKLLLSSQNNNPTTISVPTTTQKPSINKIPYSTARLSHSIFNYSFPVTQGPKFLRLFFYPSTYSNGFNRYDASFTVVSNGFTLLKDFNASLNADVEGVDTLFKEYVINVGDDQRLDLSFIPSSGNSNSYAFINGIEVLSMPDDLYYTSSTDPGFSLVESTIIPAYTISTNVALETDYRIKVGVQANSPKIQDTGMLRNWNKYDTDYLRTPTSRDFVSGDLIGRNITVNPDYVAPKDLYRSSRDLGTNATLNHLLNLTWEFPLDSGFYYFIRLHFCELDPNITTVGDRLFTVYLQGNVAEIRADVMRWTQDQKGLAVHRNYAVIVPKSNNKGNKKVNLSIQMQPYADRRETVYSDPFLNGLEIFKISDVGSKNLAGPNPEPVQTPVQEKKKSKSISGTTILGVVLGVVFGIVLVSLVVFFVCRKKRQTKEEKATTTKDSKSSATSKWGPLSFATTKSSTTHNSNLPSDLCRSFSLVEIRAATNNFDELFIVGVGGFGHVYKGYLDNGSTPVAIKRLKPGSQQGENEFINEIDMLSNLRHLHLVSLIGYCNENNEMIIVYDFMMRGTLRDHLYNTENPALSWKQRLKISIGAARGLHYLHTGAKHTIIHRDVKTTNILLDEKWIAKVSDFGLSRIGPTGVTKAHVSTVVKGSVGYLDPEYYKRQRLTEKSDVYSFGVVLFEILCARPPIIRTAEKKQVSLADWGRLCYKSGALGSIVDPSVKWSIAPECLKKFGEIAVSCLLDDGTMRPSMNDVVWMLEFALQLQESAEQRDRVVVDGVVVGDDVEGGERRNKNDDDDDVFSSSGSNIGNVSDFNKSTEVSVSTMTGSSSGENSYGFNKESVFSEIVDPKAR 905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi304g00032 905 SMART serkin_6 539 814 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi304g00032 905 FunFam Receptor-like protein kinase FERONIA 616 831 - -
Vivi304g00032 905 CDD STKc_IRAK 545 812 - -
Vivi304g00032 905 MobiDBLite consensus disorder prediction 838 889 - -
Vivi304g00032 905 ProSiteProfiles Protein kinase domain profile. 539 814 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi304g00032 905 FunFam FERONIA receptor-like kinase 32 196 - -
Vivi304g00032 905 PANTHER OS03G0124300 PROTEIN-RELATED 7 489 IPR046957 GO:0004672
Vivi304g00032 905 ProSitePatterns Serine/Threonine protein kinases active-site signature. 660 672 IPR008271 GO:0004672|GO:0006468
Vivi304g00032 905 FunFam FERONIA receptor-like kinase 226 421 - -
Vivi304g00032 905 FunFam Receptor-like protein kinase FERONIA 511 615 - -
Vivi304g00032 905 MobiDBLite consensus disorder prediction 854 889 - -
Vivi304g00032 905 MobiDBLite consensus disorder prediction 838 853 - -
Vivi304g00032 905 SUPERFAMILY Protein kinase-like (PK-like) 513 814 IPR011009 -
Vivi304g00032 905 ProSitePatterns Protein kinases ATP-binding region signature. 545 568 IPR017441 GO:0005524
Vivi304g00032 905 Gene3D Phosphorylase Kinase; domain 1 502 615 - -
Vivi304g00032 905 Pfam Malectin-like domain 35 420 IPR024788 -
Vivi304g00032 905 Gene3D - 227 421 - -
Vivi304g00032 905 Gene3D - 32 196 - -
Vivi304g00032 905 Pfam Protein tyrosine and serine/threonine kinase 545 808 IPR001245 GO:0004672|GO:0006468
Vivi304g00032 905 Gene3D Transferase(Phosphotransferase) domain 1 616 835 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi304g00032 18 905 Receptor kinase-like Gene Family AT3G51550 47.921 0.0 766
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Vivi304g00032 Malectin_like 1.1e-31 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi304g00032 - - vvo:131630062 1583.54