Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi304g00027 ATGTTCTTCTCTTTCCTTAAATCTTGTCCATGCATTCTTCTCTTCCTCTTGTTTACGCTCTTTTACACTTCAACAGAAGCTTATGATCCACTTGACCCAAATGGAAATATCACAATCAAATGGGATATTATTAGCTGGGCACCTGATGGTTATATTGCCGTTGTTACAATGTACAACTATCAACGGTATCGTCATATAACGCCGCCAGGATGGTCATTAGGATGGAAATGGGCAAAGAAAGAGGTAATATGGTCCATGGTGGGAGGGCAGACAACTGAACAAGGAGATTGCTTAAAATTCAAGGAAATCATTCCACATTGTTGTGAAAGAACTCCAACAATCATTGATTTACTTCCCGGTGCGCCTTATAATCAACAAATCGCAAATTGCTGCAAAGGCGGTGTACTCACCTCATGGACACAAGATCCAACAAATTCGGTCGCATCGTTTCGAATCACTGTCGGTAGAGCTGGCACGACTAGCAAAACTGTCAGACTGCCACACAATTTCACGTTGAAAGCACCAGGACCGGGTTATACATGCGGCCCGACAAAAATTGTGAAACCGACTAAATTCGTATCGAAAGATAAAAGGAGAGTGACACAAGCACTTATGACATGGAATGTGACATGCACATATTCACAATTTCAAGCTCAACAAATTCCAACTTGCTGTGTTTCCCTCTCGTCTTTCTATAACGATACTATAGTACCATGCCCGGCATGTTCCTGTGGCTGCCAAGGCAACACGGCCCAATCGGGAAGCTGTGTAGAAAGCGCGCCACATTTAGCCTCGGTTGTTCACAGCCCTGGAAAGAATATCATTGCGCCTTTGGTTCGATGTACTAGTCATATGTGTCCGATCCGAGTTCACTGGCATATAAAGCTCAACTATAGGGAATATTGGCGCGTAAAAGTTACTATAACTAATTTCAACTACAGGATGAATTACTCGGATTGGAACTTGGTTGTTCAACATCCAAACTTTGACAATCTGACTCAAATTTTCAGTTTCAATCACGAATCAATACTTCCCTACGGCTCGATAAATGATACTGCAATGCTATGGGGAATTAAATACTACAATGATTTCCTCATGCATGCTGGTCCTAGTGGCAATGTACAGTCAGAGATACTTTTTGGTAAGGATAAATCAACTTTTACGTTCGATAAAGGTTGGGCGTTTCCTCGAAGGATCTATTTCAATGGCGACATCTGCGTGATGCCACCGCCCGACGCTTATCCATGGTCACCTAATGACAGTTCCAGACAAGAGGTTTCTTTTCTTGCTTTGACGATGGCGTTGTTGGTAGCATTAGTGTTTTGCGCGTATGTCTAA 1338 0.426 MFFSFLKSCPCILLFLLFTLFYTSTEAYDPLDPNGNITIKWDIISWAPDGYIAVVTMYNYQRYRHITPPGWSLGWKWAKKEVIWSMVGGQTTEQGDCLKFKEIIPHCCERTPTIIDLLPGAPYNQQIANCCKGGVLTSWTQDPTNSVASFRITVGRAGTTSKTVRLPHNFTLKAPGPGYTCGPTKIVKPTKFVSKDKRRVTQALMTWNVTCTYSQFQAQQIPTCCVSLSSFYNDTIVPCPACSCGCQGNTAQSGSCVESAPHLASVVHSPGKNIIAPLVRCTSHMCPIRVHWHIKLNYREYWRVKVTITNFNYRMNYSDWNLVVQHPNFDNLTQIFSFNHESILPYGSINDTAMLWGIKYYNDFLMHAGPSGNVQSEILFGKDKSTFTFDKGWAFPRRIYFNGDICVMPPPDAYPWSPNDSSRQEVSFLALTMALLVALVFCAYV 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi304g00027 445 PIRSF COBRA 1 445 IPR006918 GO:0010215|GO:0016020
Vivi304g00027 445 PANTHER PROTEIN COBRA 15 435 IPR006918 GO:0010215|GO:0016020
Vivi304g00027 445 Pfam COBRA-like protein 51 214 IPR006918 GO:0010215|GO:0016020
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi304g00027 1 439 COBRA Gene Family AT3G02210 70.068 0.0 668
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi304g00027 - - gmx:100783820 761.14