LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi304g00024	ATGAGGTTTCTTATCTCATTTATTTGTGTTCTTGTGTTAGTCTCTTATGCTGTTGCTTATGATCCTTTGGATCCAAATGGAAATATAACAATCAAATGGGATGTTATGTCTTGGACACCAGATGGCTACGTGGCTACGGTAACGGTCAACAATTTCCAAATGTTTCGACACATAATGAATCCGGGATGGACGTTAGGATGGACATGGGCTAAGAAAGAAGTTATATGGTCAATGGTAGGAGCTCAAACAACAGAACAAGGAGATTGTTCTAAATTCAAAGGCAATATACCTCATTGTTGCAAGAAAATTCCTACAGTTGTAGACCTTCTACCTGGTGTACCTTACAACCAACAGTTTTCGAACTGTTGTAAAGGTGGAGTTGTTGCGGCTTGGGGACAAGATCCTTCGCAATCTATATCGGCTTTTCAAGTTAGTGTTGGACAAGGTGGAACCTCGAACAAAACGGTTAAACTTCCGAAGAATTTCACTCTTTTGGCTCCTGGACCTGGTTATACTTGTGGCCCTGCAAAAGTTGTTCCTTCCACTGTTTTTCTTACGACTGATAAGCGACGAAAGACTCAGGCGTTGATGACATGGAATGTTACCTGCACATATTCACAGTTTCTAGCAAGAAAGAATCCAAGTTGTTGTGTATCTTTATCATCCTTCTACAATGAAACAATTACACCTTGTCCCTCATGTGCATGTGGCTGCCAAAACAAGAAGAACTGTGTAAAGAGTGAATCTAAAATTCTAAGCATGGTTGGAGCTCACACTCCAAAGAAAGACAATGAACCATTGATGCAATGCACTCATCATATGTGTCCAATTAGGGTTCATTGGCACGTGAAGACTAACTATAAAGAATATTGGCGCGTCAAAATCGCAGTAACGAATTTCAATTACAGGATGAATTATACTCTCTGGAGTCTTGCTATTCAACATCCAAATCTTAACAATGTCACACAAGTTTTCAGCTTCAATTACAAGCCACTTCTTCCCTATGAATCCATAAATGACACGGGAATGTTCTTCGGAATGAAATACTTCAATGATCTACTAATGGAAGCTGGACCAAAGGGAAACATTCAATCAGAAGTATTACTTCAGAAAGACAATAAATTCACATTCAAACAAGGATGGGCATTTCCTCATAAGGTTTACTTCAATGGTGATGAATGCATGCTTCCTCCACCTGATACATACCCCTTTCTCCCTAATTCTTCACCTGCAAGCCTAGTTACCCTCAAGGCACTCATCTTCTCTTTACTTTTACTGCTAGCAGTTTCGTAG	1293	0.3975	MRFLISFICVLVLVSYAVAYDPLDPNGNITIKWDVMSWTPDGYVATVTVNNFQMFRHIMNPGWTLGWTWAKKEVIWSMVGAQTTEQGDCSKFKGNIPHCCKKIPTVVDLLPGVPYNQQFSNCCKGGVVAAWGQDPSQSISAFQVSVGQGGTSNKTVKLPKNFTLLAPGPGYTCGPAKVVPSTVFLTTDKRRKTQALMTWNVTCTYSQFLARKNPSCCVSLSSFYNETITPCPSCACGCQNKKNCVKSESKILSMVGAHTPKKDNEPLMQCTHHMCPIRVHWHVKTNYKEYWRVKIAVTNFNYRMNYTLWSLAIQHPNLNNVTQVFSFNYKPLLPYESINDTGMFFGMKYFNDLLMEAGPKGNIQSEVLLQKDNKFTFKQGWAFPHKVYFNGDECMLPPPDTYPFLPNSSPASLVTLKALIFSLLLLLAVS	430

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi304g00024	430	PANTHER	PROTEIN COBRA	6	423	IPR006918	GO:0010215\|GO:0016020
	Vivi304g00024	430	PIRSF	COBRA	1	430	IPR006918	GO:0010215\|GO:0016020
	Vivi304g00024	430	Pfam	COBRA-like protein	43	206	IPR006918	GO:0010215\|GO:0016020

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vivi304g00024	3	427	COBRA Gene Family	AT3G29810	65.287	0.0	614

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi304g00024	-		-	gmx:100798678	822.387