Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi303g00017 ATGAATCTTTTCTTTTTAGCTATAAAAGAAAGTGCAGCAGTAGCATCCCAGCAAACCACACACTCTCTCTCCTTTTGGCAACCCAACTTCAAATTTCTATCTACAATGTCTAGAGCCAAACAGGTTATTACATGCAAAGCTGCTATATGCTGGGGTGTAGGAAAGAGAGTGACTGTCGAAGAGATTCAAGTAGATCCACCTAAGGCAACAGAAGTTCGTGTTAAGATGTTGTGTTCCAGTATCTGCCACACAGACATCTCAAGTCTTCAAGGATTTCCACATAATCAGTTTCCTCTAGCACTTGGACACGAAGGAATAGGTGTTGTAGAAAGTGTTGGTGATGAAATAACAAACCTAAAGGAAGGTGATTTGATAATTCCGACATACATAGGAGAGTGTGGAGAATGTGAGAATTGTGGTTCAGGGAAAACAAATTTATGTTTGACACATCCTGTGAGGTTGACTGGTTTAATGCCAGACAACACTTCGAGGTTGTCTGTACGAGGTCAAACAGTGTACCATGTTTTGAGCTGTGCTACATGGTCAGAGTATGTGGTTGTTGATGTCAACTACCTTGTCAAAGTTGATCCAACCATTAATCTACCTTATGCTAGTTTCATCTCATGTGGTTTTTCAACTGGTTATGGAGCTTCTTGGAAAGAAGCCATTGTTGAAACTGGTTCAACTGTGGCTGTTTTTGGTCTTGGTGCTGTTGGATTAGGGGCGATAAGTGGTGCCAAGATGATGGGAGCAAGTAAGATTATTGGTGTTGATATAAACGAGATGAAGAAGGAGAAAGGAGAGGCTTTTGGAATGACTCATTTTATAAATAGTAATGTTTCTGATAAATCTGCTTCTGATTTGGTTAAAGAGTTAACTGGAATGGGTGTGGATTATTGTATTGAATGCACAGGTGTTGCATCTATGCTTACTGAATCTCTTGAAGCCACAAAAAAGGGAACAGGTAAAACAATTGCAGTTGGTATAGGAGCTGAACTTGTTGTACCCTTAGGAGTTCTTGCTATTCAGTTTGGTAGAACCTTAAAAGGTTCTGCTTTTTGA 1062 0.3983 MNLFFLAIKESAAVASQQTTHSLSFWQPNFKFLSTMSRAKQVITCKAAICWGVGKRVTVEEIQVDPPKATEVRVKMLCSSICHTDISSLQGFPHNQFPLALGHEGIGVVESVGDEITNLKEGDLIIPTYIGECGECENCGSGKTNLCLTHPVRLTGLMPDNTSRLSVRGQTVYHVLSCATWSEYVVVDVNYLVKVDPTINLPYASFISCGFSTGYGASWKEAIVETGSTVAVFGLGAVGLGAISGAKMMGASKIIGVDINEMKKEKGEAFGMTHFINSNVSDKSASDLVKELTGMGVDYCIECTGVASMLTESLEATKKGTGKTIAVGIGAELVVPLGVLAIQFGRTLKGSAF 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi303g00017 353 Gene3D - 48 353 - -
Vivi303g00017 353 FunFam S-(hydroxymethyl)glutathione dehydrogenase 214 351 - -
Vivi303g00017 353 Gene3D - 214 351 - -
Vivi303g00017 353 PANTHER ALCOHOL DEHYDROGENASE 41 353 - -
Vivi303g00017 353 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 204 352 IPR036291 -
Vivi303g00017 353 SUPERFAMILY GroES-like 39 222 IPR011032 -
Vivi303g00017 353 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 102 116 IPR002328 GO:0008270|GO:0016491
Vivi303g00017 353 Pfam Alcohol dehydrogenase GroES-like domain 70 195 IPR013154 -
Vivi303g00017 353 Pfam Zinc-binding dehydrogenase 237 352 IPR013149 -
Vivi303g00017 353 FunFam alcohol dehydrogenase 1-like isoform X1 53 213 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi303g00017 71 209 Monolignol Biosynthesis Gene Families AT4G37970 30.496 7.49e-14 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi303g00017 K00121 - gmx:100798341 486.493