Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi302g00031 ATGAACGCCGGCGGAGCCACCGTCATCCGATCCATCCTCGATAAACCTCTCAACCAGCTCACCGAAGATGACATTTCTCAACTCACCCGCGAAGACTGTCGCAGATTCCTCAAAGATAAAGGGATGCGCAGGCCTTCCTGGAACAAATCTCAGGCGATCCAGCAGGTTATTTCACTCAAAGCGCTTCTTGAACCTACCGACGATGATTCTCCCGCGCCGGTTTCCTCCGCCATACACCGCCATCATCACCACCACGTTCAATCTCCTCAAGTGAATTTGAGTGAAGCTCCGGTGAAGGGTTCGGATCCTGATGAGATCGGTGTTCGGGCTGTGGAAGATGTTCAGAAATCCATTTCTCCTGTTGCAGATAAACCTAATGAAACAAATGATGCTCCTGCCGGAGGGTGCGCGCCTAGTGGGTCATTTGGGCAAATGACAATTTTCTACTGTGGTAAGGTGAATGTCTATGATGGAGTCTCACCGGATAAGGCACAGTCAATCATGCAACTGGCTGCAAGTCCGTCCACGTTTCCTCAAGACAGTCCTTTAAATAAAAATGCAGCAGTTTGGGCTTCCTGCAGCATACCAATTGATAAGGATGCCCTCTTCCCCACTAACACAGCAATCCTTCAAGTTTCTCAAACGGATAAGATGGTGGAATATCCTCTGCAATACAGGGAGAAAGGGAGCACGCCTCGAGATGCTGTGAAAGCCCACACCTCAAATGGGAACTCAAGTCGTAGTAGCACTGACTCTCCACCACAGACTAGACTGCCTCTAGTTTCCAGTGGCTCAGCTGACAACCAGCCAAAAGTTGCCCTTCCTATTGATCTGAATGATAAAGATGTTCAAGAATGCTAA 861 0.4901 MNAGGATVIRSILDKPLNQLTEDDISQLTREDCRRFLKDKGMRRPSWNKSQAIQQVISLKALLEPTDDDSPAPVSSAIHRHHHHHVQSPQVNLSEAPVKGSDPDEIGVRAVEDVQKSISPVADKPNETNDAPAGGCAPSGSFGQMTIFYCGKVNVYDGVSPDKAQSIMQLAASPSTFPQDSPLNKNAAVWASCSIPIDKDALFPTNTAILQVSQTDKMVEYPLQYREKGSTPRDAVKAHTSNGNSSRSSTDSPPQTRLPLVSSGSADNQPKVALPIDLNDKDVQEC 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi302g00031 286 MobiDBLite consensus disorder prediction 235 269 - -
Vivi302g00031 286 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 13 236 IPR040390 -
Vivi302g00031 286 Pfam tify domain 144 172 IPR010399 -
Vivi302g00031 286 SMART tify_2 138 173 IPR010399 -
Vivi302g00031 286 MobiDBLite consensus disorder prediction 65 104 - -
Vivi302g00031 286 ProSiteProfiles Tify domain profile. 138 173 IPR010399 -
Vivi302g00031 286 MobiDBLite consensus disorder prediction 226 286 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi302g00031 5 235 Tify Gene Family AT4G14720 39.922 1.98e-46 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Vivi302g00031 tify 5.1e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi302g00031 - - vvo:131643492 501.901