Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi302g00030 ATGAACGCCGGCGGAGCCACCGTCATCCGATCCATCCTCGATAAACCTCTCAACCAGCTCACCGAAGATGACATTTCTCAACTCACCCGCGAAGACTGTCGCAGATTCCTCAAAGATAAAGGGATGCGCAGGCCTTCCTGGAACAAATCTCAGGCGATCCAGCAGGTTATTTCACTCAAAGCGCTTCTTGAACCTACCGACGATGATTCTCCCGCGCCGGTTTCCTCCGCCATACACCGCCATCATCACCACCACGTTCAATCTCCTCAAGTGAATTTGAGTGAAGCTCCGGTGAAGGGTTCGGATCCTGATGAGATCGGTGTTCGGGCTGTGGAAGATGTTCAGAAATCCATTTCTCCTGTTGCAGATAAACCTAATGAAACAAATGATGCTCCTGCCGGAGGGTGCGCGCCTAGTGGGTCATTTGGGCAAATGACAATTTTCTACTGTGGTAAGGTGAATGTCTATGATGGAGTCTCACCGGATAAGGCACAGTCAATCATGCAACTGGCTGCAAGTCCGTCCACGTTTCCTCAAGACAGTCCTTTAAATAAAAATGCAGCAGTTTGGGCTTCCTGCAGCATACCAATTGATAAGGATGCCCTCTTCCCCACTAACACAGCAATCCTTCAAGTTTCTCAAACGGATAAGATGGTGGAATATCCTCTGCAATACAGGGAGAAAGGGAGCACGCCTCGAGATGCTGATGTAGAGGGTCAGGCAAGCAGAAAAGTGTCACTGCAGCGATATCTTGAAAAGCGAAAGGACAGGGGAAGACCAAAGGGAAAGAAACTGACTGGCATAACTTCATCTAACTTTGAGATGTATTTGAACCTTCCAGTGAAAGCCCACACCTCAAATGGGAACTCAAGTCGTAGTAGCACTGACTCTCCACCACAGACTAGACTGCCTCTAGTTTCCAGTGGCTCAGCTGACAACCAGCCAAAAGTTGCCCTTCCTATTGATCTGAATGATAAAGATGTTCAAGAATGCTAA 996 0.4829 MNAGGATVIRSILDKPLNQLTEDDISQLTREDCRRFLKDKGMRRPSWNKSQAIQQVISLKALLEPTDDDSPAPVSSAIHRHHHHHVQSPQVNLSEAPVKGSDPDEIGVRAVEDVQKSISPVADKPNETNDAPAGGCAPSGSFGQMTIFYCGKVNVYDGVSPDKAQSIMQLAASPSTFPQDSPLNKNAAVWASCSIPIDKDALFPTNTAILQVSQTDKMVEYPLQYREKGSTPRDADVEGQASRKVSLQRYLEKRKDRGRPKGKKLTGITSSNFEMYLNLPVKAHTSNGNSSRSSTDSPPQTRLPLVSSGSADNQPKVALPIDLNDKDVQEC 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi302g00030 331 MobiDBLite consensus disorder prediction 282 314 - -
Vivi302g00030 331 MobiDBLite consensus disorder prediction 226 240 - -
Vivi302g00030 331 Pfam Jas motif 240 257 IPR018467 -
Vivi302g00030 331 SMART tify_2 138 173 IPR010399 -
Vivi302g00030 331 MobiDBLite consensus disorder prediction 65 104 - -
Vivi302g00030 331 ProSiteProfiles Tify domain profile. 138 173 IPR010399 -
Vivi302g00030 331 MobiDBLite consensus disorder prediction 226 269 - -
Vivi302g00030 331 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 13 274 IPR040390 -
Vivi302g00030 331 MobiDBLite consensus disorder prediction 282 331 - -
Vivi302g00030 331 Pfam tify domain 144 172 IPR010399 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi302g00030 5 278 Tify Gene Family AT4G14720 44.518 1.02e-68 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Vivi302g00030 tify 6.2e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi302g00030 - - vvo:131643492 604.749