Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi302g00029 ATGAACGCCGGCGGAGCCACCGTCATCCGATCCATCCTCGATAAACCTCTCAACCAGCTCACCGAAGATGACATTTCTCAACTCACCCGCGAAGACTGTCGCAGATTCCTCAAAGATAAAGGGATGCGCAGGCCTTCCTGGAACAAATCTCAGGCGATCCAGCAGGTTATTTCACTCAAAGCGCTTCTTGAACCTACCGACGATGATTCTCCCGCGCCGGTTTCCTCCGCCATACACCGCCATCATCACCACCACGTTCAATCTCCTCAAGTGAATTTGAGTGAAGCTCCGGTGAAGGGTTCGGATCCTGATGAGATCGGTGTTCGGGCTGTGGAAGATGTTCAGAAATCCATTTCTCCTGTTGCAGATAAACCTAATGAAACAAATGATGCTCCTGCCGGAGGGTGCGCGCCTAGTGGGTCATTTGGGCAAATGACAATTTTCTACTGTGGTAAGGTGAATGTCTATGATGGAGTCTCACCGGATAAGGCACAGTCAATCATGCAACTGGCTGCAAGTCCGTCCACGTTTCCTCAAGACAGTCCTTTAAATAAAAATGCAGCAGTTTGGGCTTCCTGCAGCATACCAATTGATAAGGATGCCCTCTTCCCCACTAACACAGCAATCCTTCAAGTTTCTCAAACGGATAAGATGGTGGAATATCCTCTGCAATACAGGGAGAAAGGGAGCACGCCTCGAGATGCTGAGGGTCAGGCAAGCAGAAAAGTGTCACTGCAGCGATATCTTGAAAAGCGAAAGGACAGGGGAAGACCAAAGGGAAAGAAACTGACTGGCATAACTTCATCTAACTTTGAGATGTATTTGAACCTTCCAGTGAAAGCCCACACCTCAAATGGGAACTCAAGTCGTAGTAGCACTGACTCTCCACCACAGACTAGACTGCCTCTAGTTTCCAGTGGCTCAGCTGACAACCAGCCAAAAGTTGCCCTTCCTATTGATCTGAATGATAAAGATGTTCAAGAATGCTAA 990 0.4838 MNAGGATVIRSILDKPLNQLTEDDISQLTREDCRRFLKDKGMRRPSWNKSQAIQQVISLKALLEPTDDDSPAPVSSAIHRHHHHHVQSPQVNLSEAPVKGSDPDEIGVRAVEDVQKSISPVADKPNETNDAPAGGCAPSGSFGQMTIFYCGKVNVYDGVSPDKAQSIMQLAASPSTFPQDSPLNKNAAVWASCSIPIDKDALFPTNTAILQVSQTDKMVEYPLQYREKGSTPRDAEGQASRKVSLQRYLEKRKDRGRPKGKKLTGITSSNFEMYLNLPVKAHTSNGNSSRSSTDSPPQTRLPLVSSGSADNQPKVALPIDLNDKDVQEC 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi302g00029 329 MobiDBLite consensus disorder prediction 280 312 - -
Vivi302g00029 329 Pfam Jas motif 238 255 IPR018467 -
Vivi302g00029 329 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 13 272 IPR040390 -
Vivi302g00029 329 MobiDBLite consensus disorder prediction 227 267 - -
Vivi302g00029 329 Pfam tify domain 144 172 IPR010399 -
Vivi302g00029 329 SMART tify_2 138 173 IPR010399 -
Vivi302g00029 329 MobiDBLite consensus disorder prediction 65 104 - -
Vivi302g00029 329 ProSiteProfiles Tify domain profile. 138 173 IPR010399 -
Vivi302g00029 329 MobiDBLite consensus disorder prediction 280 329 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi302g00029 5 276 Tify Gene Family AT4G14720 43.854 4.16e-65 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Vivi302g00029 tify 6.2e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi302g00029 - - vvo:131643492 595.89