Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi302g00020 ATGGGAAAAAAAGGTAAATGGCTTAAGAATTTCTTGACAGGGAAAAGAGAGAAAGATAAAGAGAAAGAGAAATCTACAATAAACCAGAATTTTTCTAATGGAACAGAAAATCCAACTACTCCGATTTCGAGTTCAAATTCAAGTTCTACGAAGGAGAAAAAGAGATGGAGTTTTAGAAGGTCGTCTGCATCGGCTACGCCAACGGTTTCTAAGGAGTTGAGTAAATCTGAAGTTATTGCTTCAGTGACAGTACCAACTGTTACGGTTACTGATATTCAGAATGAGCAGAGAAATCATGCTTTGGCTGTGGCTGTTGCTACCGCGGCTGCAGCTGATGCAGCAGTGGCTGCTGCGCAGGCTGCAGCTGTTGTGATCCGCTTGACTTCTGGTTCGAATGAGAATTCTAGAAGTATTGAAGAGGCTGCTGCTGTTAAAATTCAATGCGTCTATCGATCTCACTTGGCACGAAAGGCGTTGCGTGCTTTGAGAGGATTAGTGAAGTTGCAGGCACTGATAAGGGGTCACTTGGTGAGAAAACAGGCTAAGGCAACACTTAGATGTATGCAGGCTTTGGTGACAGCACAAGCTAGAGCTCGTGCTCAACGGATTCGAATGGTGTCCGAAGGAAGGCCTAATCCAAATCAATCAACTCCTAGAAATGTCATGGAAAATGACTTGTTCAGGCAAATATACAATGAAATGGACAGAGGCTTAGAAGACAACATCAAGATTGTGGAAATGGACTTTTGTGAATCAAAAGGTAACTCTACAAGCAGAAGCAGCAGTGTAAATCATCATGGACAATATTATGAACAATCTGAACATAGATATTCCACAAATGGTTCCTATTCTTACTCAAAAGAAGAAAACTACAAAGTATCACCAGCTCCATCAGCTGTAACAGAAATGAGTCCAAAAGCATGCAGTGGCCATTTCGAAGATTGCTTCAGCACAGCACAAAGCAGCCCTCATTACTATTCTGCTATATCGAAAACTGACGATTCAGCTTCAAACCATCCTTTTTCATTCCCTAGACCATCTTATGCAGAACCTATGTCCTATGATTACCCTTTGTATCCAAGTTACATGGCTAATACAGAATCATCCAAGGCTAAAGCTAGATCACACAGTGCACCAAAACAAAGGCCAGATTCATTTGAGAGGCAACCGAGCCGACGAAGAATTTCGGTCGAGGGAAGAAATGTACCTAGGCCAGTGAGAATGCAAAGGTCATCTTCACATGTTGGTGCCACTGCTCAGAATTACCAATATCCATGGTCAATTAAGCTTGATAGATCGGCGGTCTCGCTCCACGACAGCGAGTGTGGCTCGACAAGTACAATGCTTACGAATACTAATTACTGCAGATCTCTTGTTGCATATGATCCAGATGGAGATAGGAACTGA 1407 0.425 MGKKGKWLKNFLTGKREKDKEKEKSTINQNFSNGTENPTTPISSSNSSSTKEKKRWSFRRSSASATPTVSKELSKSEVIASVTVPTVTVTDIQNEQRNHALAVAVATAAAADAAVAAAQAAAVVIRLTSGSNENSRSIEEAAAVKIQCVYRSHLARKALRALRGLVKLQALIRGHLVRKQAKATLRCMQALVTAQARARAQRIRMVSEGRPNPNQSTPRNVMENDLFRQIYNEMDRGLEDNIKIVEMDFCESKGNSTSRSSSVNHHGQYYEQSEHRYSTNGSYSYSKEENYKVSPAPSAVTEMSPKACSGHFEDCFSTAQSSPHYYSAISKTDDSASNHPFSFPRPSYAEPMSYDYPLYPSYMANTESSKAKARSHSAPKQRPDSFERQPSRRRISVEGRNVPRPVRMQRSSSHVGATAQNYQYPWSIKLDRSAVSLHDSECGSTSTMLTNTNYCRSLVAYDPDGDRN 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi302g00020 468 MobiDBLite consensus disorder prediction 367 415 - -
Vivi302g00020 468 Pfam IQ calmodulin-binding motif 141 160 IPR000048 GO:0005515
Vivi302g00020 468 Pfam IQ calmodulin-binding motif 166 182 IPR000048 GO:0005515
Vivi302g00020 468 PANTHER IQ-DOMAIN 5-RELATED 1 398 - -
Vivi302g00020 468 MobiDBLite consensus disorder prediction 254 283 - -
Vivi302g00020 468 ProSiteProfiles IQ motif profile. 139 167 IPR000048 GO:0005515
Vivi302g00020 468 Pfam Protein of unknown function (DUF4005) 323 400 IPR025064 -
Vivi302g00020 468 MobiDBLite consensus disorder prediction 373 400 - -
Vivi302g00020 468 MobiDBLite consensus disorder prediction 27 51 - -
Vivi302g00020 468 MobiDBLite consensus disorder prediction 10 26 - -
Vivi302g00020 468 ProSiteProfiles IQ motif profile. 163 190 IPR000048 GO:0005515
Vivi302g00020 468 Gene3D - 139 190 - -
Vivi302g00020 468 MobiDBLite consensus disorder prediction 1 70 - -
Vivi302g00020 468 SMART iq_5 138 160 IPR000048 GO:0005515
Vivi302g00020 468 SMART iq_5 161 182 IPR000048 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi302g00020 1 458 IQD Protein Family AT4G14750 43.659 2.96e-101 309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi302g00020 - - gmx:100817667 613.609