Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi302g00019 ATGGAAATTCTCATCTTTTCCATTCTCATCCTATCCTCCATCAACCCCTCCCACCAAGCTCTCCCACCTCTCAACCCAAGACTCATCAAAGCCCACACAGCAATCCAAGCATGGAAACAAACCTTCACCTCTGACCCAAAAAACTTCACCTCAAACTGGTATGGCCCAAACGTCTGCAACTACACAGGTATCTACTGTGCACCCTCCCCACAAGATCCCTACATCTACACAGTTGCTGGCATAGACATAAACCATGCAAACATAGCAGGTTCATTACCGGAAGAGCTAGGTCTTCTAAAAGACCTAGCTCTCTTCCACATTAACTCAAACAGTTTCCATGGTTCCCTTCCAAACACCTTCGACTCTCTCGAATTTCTCCACGAGCTCGACATCAGTAACAACAAATTCTCCGGACCATTCCCGGAAGTTGTTTTATGCATTACTTCATTGAAATTCTTAGACATAAGATTCAATAATTTTCAAGGAAATGTTCCTGAGAAACTCTTTGATTTAAAACTTGATGCAGTTTTTATCAACGATAATAAATTTCAATTCTCTTTGCCGGAGAATTTCGGAAACTCTACGGTTTCTGTTGTGGTTTTCGCGAATAACAATATCAAAGGTTGTATTCCGTCGAGTGTGGTGAAAATGAAGGACACCATTAACGAGATTATAATGGTTAACAGTGGAATGAAAGGCTGTTTACCGGATGAAATTGGTGAGTTGGATAAAGTGACGGTGTTTGATGTTAGTTATAATGAGTTTGTTGGTGAGTTGCCGGAGAGTATTGGCGGCATGAAGAGTTTGGAGCAGTTGAATGTGGCGCATAATAGGTTTTCTGGTGTGGTTCCGGAGAGTGTTTGTAGGTTGCCGAGGTTGGAGAATTTTACGTATTCGTTTAACTTTTTCAGTGATGAATCGGAGAGTTGTGTTGAGTTGAAAAGTAAGGATGATAGGTTGAATTGTATTCCTTTTAGGCCGTTGCAAAGGTCGGGTTATGAGTGTGAAGTTTTTTATAAACATCCTGTTCATTGTAGTGGTGTTGGTTGTTCTTTTACATCTCCGTCACCTCCACCTCCATCTCCACCACCTCCTCCGCCTCCACCTCCTCCTCCTCCACCTCCTCCGCCTCCACCTCCACCTCCACCTCCACCTCCACCCCCTCCACCACCATCACCACCTCCTCCTGTGGAAGTTTACTACCATTATCTATGA 1215 0.4362 MEILIFSILILSSINPSHQALPPLNPRLIKAHTAIQAWKQTFTSDPKNFTSNWYGPNVCNYTGIYCAPSPQDPYIYTVAGIDINHANIAGSLPEELGLLKDLALFHINSNSFHGSLPNTFDSLEFLHELDISNNKFSGPFPEVVLCITSLKFLDIRFNNFQGNVPEKLFDLKLDAVFINDNKFQFSLPENFGNSTVSVVVFANNNIKGCIPSSVVKMKDTINEIIMVNSGMKGCLPDEIGELDKVTVFDVSYNEFVGELPESIGGMKSLEQLNVAHNRFSGVVPESVCRLPRLENFTYSFNFFSDESESCVELKSKDDRLNCIPFRPLQRSGYECEVFYKHPVHCSGVGCSFTSPSPPPPSPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPSPPPPVEVYYHYL 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi302g00019 404 Gene3D Ribonuclease Inhibitor 196 322 IPR032675 -
Vivi302g00019 404 Gene3D Ribonuclease Inhibitor 30 195 IPR032675 -
Vivi302g00019 404 FunFam Leucine-rich repeat extensin-like protein 1 32 193 - -
Vivi302g00019 404 PRINTS Proline rich extensin signature 367 388 - -
Vivi302g00019 404 PRINTS Proline rich extensin signature 389 404 - -
Vivi302g00019 404 PRINTS Proline rich extensin signature 355 367 - -
Vivi302g00019 404 Pfam Leucine rich repeat N-terminal domain 34 66 IPR013210 -
Vivi302g00019 404 MobiDBLite consensus disorder prediction 354 394 - -
Vivi302g00019 404 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 20 397 - -
Vivi302g00019 404 SUPERFAMILY L domain-like 34 311 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi302g00019 14 350 Leucine-rich Repeat extension Gene Families AT3G22800 65.982 1.03e-161 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi302g00019 - - tpra:123881562 624.78