Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g08010 ATGGGGTGGTTAACGAACCGTTGGACCGGCGTCGCGGCGGCGATATGGATCCAATCGAGCTGCGGTGCATCGTACACCTTCAGCATCTACTCTCCGATCCTCAAATCAACACAAGGCTACGATCAATCAACTCTCGACACTGTTTCCGTCTTCAAAGACATCGGCGCCAACTTCGGCGTTCTCGCCGGTCTCCTTTACTCCGCCGTGACGCCTTACGGTGAACGATCGCTGACATCTAAGTCGAATTGGAGTTCACTCGGCGGTCCTTGGATTGTTGTGGCTGCCGGTGCTGTTCAGTGTTTTGTGGGCTTTTTCTTCATTTGGGCTTCGGTTGTGGGATTGATCAATCAGCCTCCTGTTCCTCTTATGTGCTTTTTCGCTTGGCTTTCTGCTAATGGTCAAACGTTCTTGAATACTACCAATGTTGTTACTGGCTTGCGTAATTTTCCTCAATATGGTGGCACCATCATTGGTATCATGAAGGGTTTTCTTGGGCTAAGTGGAGCTATCCTGATTCAACTGTATCATGCATTTTTTGATGGTGAACCAGCCACCTTTCTTTTGATGATAGCTTGCTTACCTGCAATCATTTCTCTGTTGTTTATGTTTCTGTTGAGGATCTATGAATTGCAAGATTATAATTACAAAAAGCATTTGGATGGTTTCTCCGTGGTCACTGTTATTATTGTTGTGTATCTTATGTTCATAATAGTTCTGCAGAATTTCGTGAGCTTGCCATATTGGGCACGGGTTTTTACGTTTGTTGTGCTTATGGTTCTACTAGCATCGCCGTTTGGCATTGCTGTGAAAGCTCAGAGAGAGGACTCGAAGATATTTTCACAAAGTCAATCCATTGAGACTGCTGCCCCTGCAATAGAATACCAAGAGCTGCCTAGAGAGGAGGTGCAAGAACAGGATACTTCGGGTGATAAGTTGCCCCTTGATGTAGAGATGAACATATTACAAGCTTTGTGTACCGTTGAGTTTTGGATGTTGTTTGTGACCATGATAGCCGGTTTGGGTTCTGGGCTTACGATGATAAATAATATGAGTCAAATAGGAGAATCTTTTGGGTATAGTACTATTGAAATTAGCAATATGGTGTCATTATGGAGTATGTGGAATTTTCTCGGCCGCTTTGGTGGCGGCCATGTATCGGATTATATAATGCACAAAAGAGGATGGCCGCGGCCCCTGTTGTTGGCTGTAACTCTGGGGATTACAATTCTTGGTCATTTAATCATAGCTTCTGGTTTCCCTGGAAATTTTTATTTGGGTCCTGTCCTGGTGGGAATTTGCTATGGCACAAATTGGTCCTTAATGCCAACAATCACTTCTGAGATATTTGGAGTGAAGCACATGGGTACCATTTTCAACGCTATTGCTGCAGCTAGTCCACTTGGGTCTTATATACTTTCTGTGAGAGTTGTTGGATATATATATGACAAGGAAGCAAGTGAAGATAACTCATGCTTCGGCATCCACTGTTTCATGTTGTCATTTCTGATCCTGGCCGGTGTGTCTTTTCTAGCATTTTTGGTCAGTCTGGCATTGTATTTCCGGACCCGAAGGTTCTATAAGCTAGTTGTTATTAGAAAATTAAAATATTATGCGAGATGA 1620 0.4358 MGWLTNRWTGVAAAIWIQSSCGASYTFSIYSPILKSTQGYDQSTLDTVSVFKDIGANFGVLAGLLYSAVTPYGERSLTSKSNWSSLGGPWIVVAAGAVQCFVGFFFIWASVVGLINQPPVPLMCFFAWLSANGQTFLNTTNVVTGLRNFPQYGGTIIGIMKGFLGLSGAILIQLYHAFFDGEPATFLLMIACLPAIISLLFMFLLRIYELQDYNYKKHLDGFSVVTVIIVVYLMFIIVLQNFVSLPYWARVFTFVVLMVLLASPFGIAVKAQREDSKIFSQSQSIETAAPAIEYQELPREEVQEQDTSGDKLPLDVEMNILQALCTVEFWMLFVTMIAGLGSGLTMINNMSQIGESFGYSTIEISNMVSLWSMWNFLGRFGGGHVSDYIMHKRGWPRPLLLAVTLGITILGHLIIASGFPGNFYLGPVLVGICYGTNWSLMPTITSEIFGVKHMGTIFNAIAAASPLGSYILSVRVVGYIYDKEASEDNSCFGIHCFMLSFLILAGVSFLAFLVSLALYFRTRRFYKLVVIRKLKYYAR 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g08010 539 SUPERFAMILY MFS general substrate transporter 4 207 IPR036259 -
Vivi2g08010 539 CDD MFS_Mch1p_like 7 511 - -
Vivi2g08010 539 Pfam Major Facilitator Superfamily 332 524 IPR011701 GO:0022857|GO:0055085
Vivi2g08010 539 Gene3D MFS general substrate transporter like domains 318 528 IPR036259 -
Vivi2g08010 539 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 8 527 - -
Vivi2g08010 539 ProSiteProfiles Major facilitator superfamily (MFS) profile. 327 539 IPR020846 GO:0022857
Vivi2g08010 539 Pfam Nodulin-like 7 268 IPR010658 -
Vivi2g08010 539 SUPERFAMILY MFS general substrate transporter 248 524 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g08010 Vivi-Chr2 230191846 230193854 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g08010 1 536 Nodulin-like Gene Family AT1G74780 55.699 0.0 602
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g08010 - - gmx:100799596 862.062