Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vivi2g08001 | ATGGCAGGGTACTTGCTACTTTTAGTATTTCTACTTTCTTTGATTTTTCCTTTCGTTGTTCGTGCTCAGAACAACCAATCAGGATTCATTAGTATTGACTGTGGACTAGTGGATGAACCAAGCTACACAGATGAAACTACTTCCATCTATTACACTTGGGATGTTAATTTCACAGATACTGGTGTAAGCCGCAGCATATCGTCTAAACACAAGCCTTCCCTTGAAAGACAGCTCTGGAATGTAAGAAGTTTCCCAAAAGGAACAAGGAATTGCTACACCCTTTATGTTTCCCAAGGAAGTAGCAAAAAATACTTAGTCAGGGCCAGTTTTGTGTATGGTAATTATGATGGAAAAGACTCTCTTCCTGAATTTGATATTTACCTTGGAGCCAAACAGTGGGAATCTGTGGTGTTTGAGGATTCATCGAGTTTAATAACTAAGGAAATAATTTATGCCGCTTCCTCAGATTATGTTCATGTTTGTTTGTTCAATATTGGAAAGGGCACACCTTTTATTTCAGTTTTAGAGGTTAGAGTTCTTAACAGTGATGCTTATCTTGTTAACTCTTTGGAACTTTTGGCAAGGTTTGATGTAGGCTCACAGGGTGGTACAAATATCAGGTATCCAGATGATATTTATGACAGAATATGGACACCATATAACTCAAAAGACTGGAAAAAGACAGATACTTCACTCATCATAGACCAAGGAGCACCTTCATTCAATTTCTTACCGCTACCACCCTCCGCTGTCATGCAAACAACATCAATTCCAGAAAAAGACAGTGACAATATAAAGTTTTACTTCCTTCCCAAGTATAATGCCTCCAGATATTACATGTATTTGTACTTTGCTGAAATCCAGAAACTCGAGCCAAATCAAATTAGAGAGTTCAACATTTTTGTAAATGGGAAGCTTTTAAATACAGTCAACCCTTTGTACCTGCAGAGCCTGTATTATGTATCAGTTATAAGTGAAAATAAGTTGGAACTTTGGCTTAATAAGACTAGTAAATCAACTCTCCCACCACTCTTTAGTGCGATCGAGATATACATGACAAAGGACTTGTTACAATCAGAAACATATCAAACAGACGTTGATGCTATCCAAAATGTGAAGTCAATTTATGGGATCAAGAGAAACTGGCAGGGAGATCCTTGTACTCCTATGTCATATTTGTGGGATGGTCTAAACTGCAGCTATGTTGGATCTAATTCACCAAAGATCATATACTTGAACTTAACTTCTTGCGGTTTATTTGGAACTATAGCTCCAAGCATATCCAATCTAAAGTCAATAGAATATTTGGATTTGTCAAATAACAGCTTGACTGGGGCAGTGCCTGATTTCCTATCTCAGCTGCGCTTTTTGAAAGTTTTAAACCTGGAAGGAAATAAGCTATCAGGAGCAATTCCAAAAGAACTTCTTGTGCATCCTAAGAATAGTGTGCTCAAATTCAATTTTGGTGGAAATCCAAATCTTTGCTCCTCAGGTTCATGCAACAAGGGGAATGGAAATAAGGTTGTGGTTCCATTAGTAGCATCACTCGGAGGAGCTGTCGTGATACTAGCGGTAGCAATGGTTTCTTTTCGCATATACTACAAGAGACACCAAGCTTCCCATCAGCTGAGCAAGGTGGGTGCTTACTCAAGAATAAAGCAGGAACTAGAGTCAAAGAAACAAGAATTCACCTATGAAGAAGTATTAAGCATTACCAAAAACTTTGAAAAGGTTGTGGGGAAAGGAGCATCTGGAACAGTCTACCATGGGTGGATTGATGATGATACTGAGGTAGCTGTCAAAATGCTATCTTCCTCATCAGCTCAAGGATCTCTACAATTTCAAGCAGAGGCTAAACTTTTTGCCATAGTTCATCATAAATACTTGACTGGTCTTATAGGGTATTGTGATGATGGCACCAACATGGCTCTAATCTATGAGTATATGGCTAATGGAGATTTAGCCAACCACTTGTCAGATAAAAACGAAAATATATTAAGTTGGAATCAGAGACTTCAAATTGCAGTAGATGCTGCAGAAGGATTGGAGTATCTGCATCATGGCTGTAATCCACCAATTGTTCACAGAGATGTTAAATCCAAAAACATCTTACTAAATGAAAAACTCCAGGGTAAATTAGCTGATTTTGGGTTGTCAAAGATCTTTCCTAATGAAGGAGACACTCATGTCTTCACGGTTGTTGCTGGCACACCAGGATACCTTGATCCAGAGTACAATAGACTAAGCAAGCTGAGAGAAAAAAGTGATGTTTTCAGTTTCGGGGTAGTTTTGCTTGAGATAATTACAGGGCAACCTGCGATAACCAAAACTGAAGAAAAAATCCATATTATTCAGTGGGTTGGTTCCACGCTGGTGGAAAGAGAGATAAAGGATATTGTAGATCCTAGATTACAAGGAGAATTTGATATTTCCTCTGCAACGAAAGCTTTGGATACTGCAATGGCTTGTGTAGCACCAACTTCCATCAATAGACCAAGCATGAAGCATGTAGTTATGGAACTGAAACAATGTTTGGAAAACAAGATTACTCCTCCGTCTGAATCTACTTACACTCATGAGAGCTTACCCAGCAGCACCTTAGATTATGTTTCCTTTGATAGAATTAGTGGTGAGAGCTCTCTAGCGAGGTAA | 2652 | 0.3865 | MAGYLLLLVFLLSLIFPFVVRAQNNQSGFISIDCGLVDEPSYTDETTSIYYTWDVNFTDTGVSRSISSKHKPSLERQLWNVRSFPKGTRNCYTLYVSQGSSKKYLVRASFVYGNYDGKDSLPEFDIYLGAKQWESVVFEDSSSLITKEIIYAASSDYVHVCLFNIGKGTPFISVLEVRVLNSDAYLVNSLELLARFDVGSQGGTNIRYPDDIYDRIWTPYNSKDWKKTDTSLIIDQGAPSFNFLPLPPSAVMQTTSIPEKDSDNIKFYFLPKYNASRYYMYLYFAEIQKLEPNQIREFNIFVNGKLLNTVNPLYLQSLYYVSVISENKLELWLNKTSKSTLPPLFSAIEIYMTKDLLQSETYQTDVDAIQNVKSIYGIKRNWQGDPCTPMSYLWDGLNCSYVGSNSPKIIYLNLTSCGLFGTIAPSISNLKSIEYLDLSNNSLTGAVPDFLSQLRFLKVLNLEGNKLSGAIPKELLVHPKNSVLKFNFGGNPNLCSSGSCNKGNGNKVVVPLVASLGGAVVILAVAMVSFRIYYKRHQASHQLSKVGAYSRIKQELESKKQEFTYEEVLSITKNFEKVVGKGASGTVYHGWIDDDTEVAVKMLSSSSAQGSLQFQAEAKLFAIVHHKYLTGLIGYCDDGTNMALIYEYMANGDLANHLSDKNENILSWNQRLQIAVDAAEGLEYLHHGCNPPIVHRDVKSKNILLNEKLQGKLADFGLSKIFPNEGDTHVFTVVAGTPGYLDPEYNRLSKLREKSDVFSFGVVLLEIITGQPAITKTEEKIHIIQWVGSTLVEREIKDIVDPRLQGEFDISSATKALDTAMACVAPTSINRPSMKHVVMELKQCLENKITPPSESTYTHESLPSSTLDYVSFDRISGESSLAR | 883 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vivi2g08001 | 883 | SUPERFAMILY | L domain-like | 366 | 479 | - | - | |
Vivi2g08001 | 883 | Pfam | Malectin-like domain | 32 | 352 | IPR024788 | - | |
Vivi2g08001 | 883 | Pfam | Leucine rich repeat | 411 | 467 | IPR001611 | GO:0005515 | |
Vivi2g08001 | 883 | FunFam | LRR receptor-like serine/threonine-protein kinase IOS1 | 649 | 852 | - | - | |
Vivi2g08001 | 883 | SMART | serkin_6 | 573 | 845 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vivi2g08001 | 883 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 693 | 705 | IPR008271 | GO:0004672|GO:0006468 | |
Vivi2g08001 | 883 | FunFam | Leucine-rich repeat receptor-like kinase | 364 | 497 | - | - | |
Vivi2g08001 | 883 | ProSitePatterns | Protein kinases ATP-binding region signature. | 579 | 601 | IPR017441 | GO:0005524 | |
Vivi2g08001 | 883 | ProSiteProfiles | Protein kinase domain profile. | 573 | 845 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vivi2g08001 | 883 | Pfam | Protein kinase domain | 576 | 838 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vivi2g08001 | 883 | Gene3D | Ribonuclease Inhibitor | 366 | 486 | IPR032675 | - | |
Vivi2g08001 | 883 | Gene3D | Transferase(Phosphotransferase) domain 1 | 649 | 860 | - | - | |
Vivi2g08001 | 883 | Gene3D | Phosphorylase Kinase; domain 1 | 554 | 648 | - | - | |
Vivi2g08001 | 883 | SUPERFAMILY | Protein kinase-like (PK-like) | 558 | 841 | IPR011009 | - | |
Vivi2g08001 | 883 | PANTHER | OS07G0107800 PROTEIN-RELATED | 30 | 846 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vivi2g08001 | Vivi-Chr2 | 229993551 | 229998174 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vivi2g08001 | 4 | 845 | Receptor kinase-like Gene Family | AT2G19210 | 48.368 | 0.0 | 787 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-I-1 | Vivi2g08001 | Malectin_like | 2.2e-97 | CL0202 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vivi2g08001 | - | - | psat:127087401 | 1563.51 |