Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g08001 ATGGCAGGGTACTTGCTACTTTTAGTATTTCTACTTTCTTTGATTTTTCCTTTCGTTGTTCGTGCTCAGAACAACCAATCAGGATTCATTAGTATTGACTGTGGACTAGTGGATGAACCAAGCTACACAGATGAAACTACTTCCATCTATTACACTTGGGATGTTAATTTCACAGATACTGGTGTAAGCCGCAGCATATCGTCTAAACACAAGCCTTCCCTTGAAAGACAGCTCTGGAATGTAAGAAGTTTCCCAAAAGGAACAAGGAATTGCTACACCCTTTATGTTTCCCAAGGAAGTAGCAAAAAATACTTAGTCAGGGCCAGTTTTGTGTATGGTAATTATGATGGAAAAGACTCTCTTCCTGAATTTGATATTTACCTTGGAGCCAAACAGTGGGAATCTGTGGTGTTTGAGGATTCATCGAGTTTAATAACTAAGGAAATAATTTATGCCGCTTCCTCAGATTATGTTCATGTTTGTTTGTTCAATATTGGAAAGGGCACACCTTTTATTTCAGTTTTAGAGGTTAGAGTTCTTAACAGTGATGCTTATCTTGTTAACTCTTTGGAACTTTTGGCAAGGTTTGATGTAGGCTCACAGGGTGGTACAAATATCAGGTATCCAGATGATATTTATGACAGAATATGGACACCATATAACTCAAAAGACTGGAAAAAGACAGATACTTCACTCATCATAGACCAAGGAGCACCTTCATTCAATTTCTTACCGCTACCACCCTCCGCTGTCATGCAAACAACATCAATTCCAGAAAAAGACAGTGACAATATAAAGTTTTACTTCCTTCCCAAGTATAATGCCTCCAGATATTACATGTATTTGTACTTTGCTGAAATCCAGAAACTCGAGCCAAATCAAATTAGAGAGTTCAACATTTTTGTAAATGGGAAGCTTTTAAATACAGTCAACCCTTTGTACCTGCAGAGCCTGTATTATGTATCAGTTATAAGTGAAAATAAGTTGGAACTTTGGCTTAATAAGACTAGTAAATCAACTCTCCCACCACTCTTTAGTGCGATCGAGATATACATGACAAAGGACTTGTTACAATCAGAAACATATCAAACAGACGTTGATGCTATCCAAAATGTGAAGTCAATTTATGGGATCAAGAGAAACTGGCAGGGAGATCCTTGTACTCCTATGTCATATTTGTGGGATGGTCTAAACTGCAGCTATGTTGGATCTAATTCACCAAAGATCATATACTTGAACTTAACTTCTTGCGGTTTATTTGGAACTATAGCTCCAAGCATATCCAATCTAAAGTCAATAGAATATTTGGATTTGTCAAATAACAGCTTGACTGGGGCAGTGCCTGATTTCCTATCTCAGCTGCGCTTTTTGAAAGTTTTAAACCTGGAAGGAAATAAGCTATCAGGAGCAATTCCAAAAGAACTTCTTGTGCATCCTAAGAATAGTGTGCTCAAATTCAATTTTGGTGGAAATCCAAATCTTTGCTCCTCAGGTTCATGCAACAAGGGGAATGGAAATAAGGTTGTGGTTCCATTAGTAGCATCACTCGGAGGAGCTGTCGTGATACTAGCGGTAGCAATGGTTTCTTTTCGCATATACTACAAGAGACACCAAGCTTCCCATCAGCTGAGCAAGGTGGGTGCTTACTCAAGAATAAAGCAGGAACTAGAGTCAAAGAAACAAGAATTCACCTATGAAGAAGTATTAAGCATTACCAAAAACTTTGAAAAGGTTGTGGGGAAAGGAGCATCTGGAACAGTCTACCATGGGTGGATTGATGATGATACTGAGGTAGCTGTCAAAATGCTATCTTCCTCATCAGCTCAAGGATCTCTACAATTTCAAGCAGAGGCTAAACTTTTTGCCATAGTTCATCATAAATACTTGACTGGTCTTATAGGGTATTGTGATGATGGCACCAACATGGCTCTAATCTATGAGTATATGGCTAATGGAGATTTAGCCAACCACTTGTCAGATAAAAACGAAAATATATTAAGTTGGAATCAGAGACTTCAAATTGCAGTAGATGCTGCAGAAGGATTGGAGTATCTGCATCATGGCTGTAATCCACCAATTGTTCACAGAGATGTTAAATCCAAAAACATCTTACTAAATGAAAAACTCCAGGGTAAATTAGCTGATTTTGGGTTGTCAAAGATCTTTCCTAATGAAGGAGACACTCATGTCTTCACGGTTGTTGCTGGCACACCAGGATACCTTGATCCAGAGTACAATAGACTAAGCAAGCTGAGAGAAAAAAGTGATGTTTTCAGTTTCGGGGTAGTTTTGCTTGAGATAATTACAGGGCAACCTGCGATAACCAAAACTGAAGAAAAAATCCATATTATTCAGTGGGTTGGTTCCACGCTGGTGGAAAGAGAGATAAAGGATATTGTAGATCCTAGATTACAAGGAGAATTTGATATTTCCTCTGCAACGAAAGCTTTGGATACTGCAATGGCTTGTGTAGCACCAACTTCCATCAATAGACCAAGCATGAAGCATGTAGTTATGGAACTGAAACAATGTTTGGAAAACAAGATTACTCCTCCGTCTGAATCTACTTACACTCATGAGAGCTTACCCAGCAGCACCTTAGATTATGTTTCCTTTGATAGAATTAGTGGTGAGAGCTCTCTAGCGAGGTAA 2652 0.3865 MAGYLLLLVFLLSLIFPFVVRAQNNQSGFISIDCGLVDEPSYTDETTSIYYTWDVNFTDTGVSRSISSKHKPSLERQLWNVRSFPKGTRNCYTLYVSQGSSKKYLVRASFVYGNYDGKDSLPEFDIYLGAKQWESVVFEDSSSLITKEIIYAASSDYVHVCLFNIGKGTPFISVLEVRVLNSDAYLVNSLELLARFDVGSQGGTNIRYPDDIYDRIWTPYNSKDWKKTDTSLIIDQGAPSFNFLPLPPSAVMQTTSIPEKDSDNIKFYFLPKYNASRYYMYLYFAEIQKLEPNQIREFNIFVNGKLLNTVNPLYLQSLYYVSVISENKLELWLNKTSKSTLPPLFSAIEIYMTKDLLQSETYQTDVDAIQNVKSIYGIKRNWQGDPCTPMSYLWDGLNCSYVGSNSPKIIYLNLTSCGLFGTIAPSISNLKSIEYLDLSNNSLTGAVPDFLSQLRFLKVLNLEGNKLSGAIPKELLVHPKNSVLKFNFGGNPNLCSSGSCNKGNGNKVVVPLVASLGGAVVILAVAMVSFRIYYKRHQASHQLSKVGAYSRIKQELESKKQEFTYEEVLSITKNFEKVVGKGASGTVYHGWIDDDTEVAVKMLSSSSAQGSLQFQAEAKLFAIVHHKYLTGLIGYCDDGTNMALIYEYMANGDLANHLSDKNENILSWNQRLQIAVDAAEGLEYLHHGCNPPIVHRDVKSKNILLNEKLQGKLADFGLSKIFPNEGDTHVFTVVAGTPGYLDPEYNRLSKLREKSDVFSFGVVLLEIITGQPAITKTEEKIHIIQWVGSTLVEREIKDIVDPRLQGEFDISSATKALDTAMACVAPTSINRPSMKHVVMELKQCLENKITPPSESTYTHESLPSSTLDYVSFDRISGESSLAR 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g08001 883 SUPERFAMILY L domain-like 366 479 - -
Vivi2g08001 883 Pfam Malectin-like domain 32 352 IPR024788 -
Vivi2g08001 883 Pfam Leucine rich repeat 411 467 IPR001611 GO:0005515
Vivi2g08001 883 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 649 852 - -
Vivi2g08001 883 SMART serkin_6 573 845 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g08001 883 ProSitePatterns Serine/Threonine protein kinases active-site signature. 693 705 IPR008271 GO:0004672|GO:0006468
Vivi2g08001 883 FunFam Leucine-rich repeat receptor-like kinase 364 497 - -
Vivi2g08001 883 ProSitePatterns Protein kinases ATP-binding region signature. 579 601 IPR017441 GO:0005524
Vivi2g08001 883 ProSiteProfiles Protein kinase domain profile. 573 845 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g08001 883 Pfam Protein kinase domain 576 838 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g08001 883 Gene3D Ribonuclease Inhibitor 366 486 IPR032675 -
Vivi2g08001 883 Gene3D Transferase(Phosphotransferase) domain 1 649 860 - -
Vivi2g08001 883 Gene3D Phosphorylase Kinase; domain 1 554 648 - -
Vivi2g08001 883 SUPERFAMILY Protein kinase-like (PK-like) 558 841 IPR011009 -
Vivi2g08001 883 PANTHER OS07G0107800 PROTEIN-RELATED 30 846 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g08001 Vivi-Chr2 229993551 229998174 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g08001 4 845 Receptor kinase-like Gene Family AT2G19210 48.368 0.0 787
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Vivi2g08001 Malectin_like 2.2e-97 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g08001 - - psat:127087401 1563.51