Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07986 ATGGGAAAAGCTACAAGATGGTTGAAGGGTTTGTTTGGAATGAAGAAGGAGAAAGAACACAGTAACAAATCAGGTCCATTGTTTTTAGGCAAGAAGGAGAAAAAACACATTAACAAATCAGGTCCATTGTTTCTAGATAGGAAGGAGAAGAAACAATCATGTAAGGATCATCAAAATCACATTAGTCAAACAAGTGTTCAAGGTTTTGATAGTGCTAGGTACAGTCTTGCTGAAAAACAGAATGAGTACAATAAAAAAGCAATTTTTTCAAGGTCTTTAAGCCATGGCAGTAGTAGAGGTTCATTGTTTTTTGGTAGCAGGGAGTGGAGGGCTGCTGTAAAGATTCAATCTTTTTTCAGAGGCTTTTTGGCGCGAAAAGCTCTTCGAGCACTAAGAGGATTGGTTAAGATACAAGCTCTTGTTAGAGGCTTCCTTGTTAGGAAAAGAGTTGTTGCAACTCTTCATAGTATTCAAGCTCTTATGAGAGCTCAAGCCGTTGTCCGGTCACGAAGAGCGCGTAGATCCTTTGATAAGGAGAATGCGCGTCCGAAACATATCCATAGACGAAAACATTTGCAAATGTTTGATGAAACTCGAAATGTACAACATGATCATAAATGGCTGCACAATTCTGGCTCAAGTAGATTTGATCCAAACCGGGTAATCCTCGCGATTGATCCTCACAGGTCTAGTTCAAGATCTTCAATGTCCGAATATAGAGACGTTATGCATCATCACTACTACGAAACAACATCATCCTCTCTTCCAAGTCACCTTTCGCGTAGAATTTCACTTCACGAATGCCAACATTCTCATGATTTTGATTCGTGCTTCAATAATGTTAACGACGAGCATAAAGTCTTTACGGCTCATAGCACTCCTCGGTTATCAAACTCTTCCCAAGCTAATACTCCATTGGCGAAGAGCGTTTCTGAAGAGACCAGCATGTTCTTGCCTTACTCTAATTGTCCTAACTACATGGCTAATACTCAGTCATCCAAGGCAAGAGTGGTAAGGTCTCGCAGTGCTCCGAAACAAAGATCTGAGGTCAAGAAAAGGGTTCCACTTGAGGAAATAATGGCCACAAGAAATAGCTTAAGTTCTGTTAGAATGCATTGGTAA 1122 0.4037 MGKATRWLKGLFGMKKEKEHSNKSGPLFLGKKEKKHINKSGPLFLDRKEKKQSCKDHQNHISQTSVQGFDSARYSLAEKQNEYNKKAIFSRSLSHGSSRGSLFFGSREWRAAVKIQSFFRGFLARKALRALRGLVKIQALVRGFLVRKRVVATLHSIQALMRAQAVVRSRRARRSFDKENARPKHIHRRKHLQMFDETRNVQHDHKWLHNSGSSRFDPNRVILAIDPHRSSSRSSMSEYRDVMHHHYYETTSSSLPSHLSRRISLHECQHSHDFDSCFNNVNDEHKVFTAHSTPRLSNSSQANTPLAKSVSEETSMFLPYSNCPNYMANTQSSKARVVRSRSAPKQRSEVKKRVPLEEIMATRNSLSSVRMHW 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07986 373 ProSiteProfiles IQ motif profile. 110 136 IPR000048 GO:0005515
Vivi2g07986 373 PANTHER IQ-DOMAIN 5-RELATED 1 358 - -
Vivi2g07986 373 MobiDBLite consensus disorder prediction 331 350 - -
Vivi2g07986 373 ProSiteProfiles IQ motif profile. 132 159 IPR000048 GO:0005515
Vivi2g07986 373 SMART iq_5 130 151 IPR000048 GO:0005515
Vivi2g07986 373 SMART iq_5 107 129 IPR000048 GO:0005515
Vivi2g07986 373 ProSiteProfiles IQ motif profile. 158 185 IPR000048 GO:0005515
Vivi2g07986 373 Pfam IQ calmodulin-binding motif 135 149 IPR000048 GO:0005515
Vivi2g07986 373 Pfam IQ calmodulin-binding motif 110 129 IPR000048 GO:0005515
Vivi2g07986 373 Pfam Protein of unknown function (DUF4005) 295 367 IPR025064 -
Vivi2g07986 373 Gene3D - 134 183 - -
Vivi2g07986 373 Gene3D - 43 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07986 Vivi-Chr2 229835798 229837370 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g07986 1 371 IQD Protein Family AT3G16490 36.247 8.77e-49 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07986 - - psat:127083621 532.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g07986 2 229835798 229837370 Vivi2g07986 2 229835798 229837370 ECH
Vivi2g07986 2 229835798 229837370 Vivi7g03793 7 103847839 103850937 PCT