Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07985 ATGGAAATGAGTGATGATAGAGTTGATTTAGCATCGGCATCAAAAAGTTTAGATGTTGTAGAGAACATGTCAGAAGAGTGGATTCCTATATGTGAAGATGAATCCAAACCTATAATCGGTAAGATATTTGATTCTTTAGAAGAAGGAGAGAAATTTTATAAAATGTATGCACATTCTGTTGGATTTAGTGTGCGTAATTCATCTCAAACAAAGTATAAAAATGGGCTGAAATGGAAGTACTTTTTATGCTCAAAAGAAGGTTTTAAAGTAGAAAAACCGGTAACCTTGCATGGATTGGTTATTAGTGAAGATAGTTTGCCTAGAGTGAGAAAAAGAAAATTGACAAGGGAAGGATGCAATGCAAAAATTGCTTTTAGGAGGACAATAGATGGTAGATATGAAGTTGCAAAATTTTATGAAGGTCATACACATGCATTAGTCACACCTAGAAAGAAACAGCTCCTAAGATCAGCAAGGAGTGTTAACAATGCTCACAAGAAACTATTATTTTCTTGTAACAAAGCTAATGTGGGAACTTCCAAAGTTTATCAATTATTGAAAGAGCAAGTTGGGGGTTATGAAAATATAGGATGTACACAAAGAGATTTTCAAAACAATTCAAGAGATTTGAAAGAACTGATCAAAGACTCAGATGCACATATGTTTATTGATAATTTTAGAAGAAAACACGAGATGAACCATTCATTTTTCTATGACTATGCGGTTGATGATGAAGGTAGGCTGAAATATGTATTTTGGGCTGATGGTATTTGTCGAAAAAATTACTCTTTATTTGGAGATGTGATTTCATTTGACACAACATACAGTACAAACAAGTATTGTATGATTTTTGCACCATTTACAGGTGTAAATCATCATCGTCAAAGTGTAACCTTTGGAGCTGCATTCTTAGCCGATGAAAAAGTCGATTCATTTGTGTGGTTGTTTGAGTCATTTTTGAAAGCAATGGGAGGGCACAAACCTACTATGATCATAACAGATCAAGATCCAGCTATGAAGATTGCAATAGAGAAGGTATTCAATGGCTCTTCACATAGATTTTGCATGTGGCATATTTTAAAAAAAGTTTCAGAAAAGGTAGGCGTTTCCTTAAATGTCAACATTGATTTTAATAATCGTCTTAAGTCATGTGTTTGGAATTCAGAGACTCCTGAAGAATTTGAATCAAAATGGAAGAGTATTATTAGTGATTTTAAATTAGAGGAGAATGGTTGGCTTTCTCAAATGTTTGATATTAGAAGTATGTGGATACCAGCTTATTTTAAAGATATATTTATGGCGGGAATTTTGAGAACAACCTCAAGATCAGAGAGTGAAAATTCATTCTTTGGAAATTACTTGAACAAAAATCTTAGTTTGGTGGAATTTTGGATGCGATTTGATTCTGCAATAGAAGCACAAAGGCATAAGGAACTTCTTGCAGATAATGACACACTTCATTCTTTTCCAGAATTGAAGTTGCAAATGGATTTAGAGAAGCATGGTAGAGAGGTATATACTCATGAAAACTTTTACATATTTCAAAGAGAATTGTGGAGTGCATGCGTAGATTGTGGAATAGAAGAAAAGAAAGAGAAAGGTGAGAATTCATTATTTTTTATAATAGATAACATTGTGGTAAATGGAAACAAATTGAGCAAATGTAGAGAGGTTGTGTATCAACTTTCAAATCATATTGCACATTGTTCATGTAAATTGTTTGAGTCTGAAGGTATGCCCTGTCGACATATTCTTTTTATATTGAAGGGAAAAGGGTTGAATAAAATACCAAGTCATTATGTTGTTAATAGATGGACAAAGTTAGCAACAAGTAGATCCATTTTTGATTCCGATGAAAATGTGTTCGAGGAGTCTTCTAAATTTGAAAGTGAAAGTAAGTTAATCTCAAATGCATGGGCACAATTTTTTAAATGCATGCATATGGCTGGTACAAGTAAGGAGAAGCTGCTCCTCATTATAAATGATGGTGCTAGTACTGAATCAAAATTGGGTAAGATGAAGAATGATATTGCACCAACAACCTTAGATGAATTAGAGGTTTTCATCGGTTCCAATGTACCAAAAGAAATTGATATTTTTCCACCCGAGCATTCAAATACCAAAGGATGTGGAAAACGAATTAAAGGGGGAAAAGAGAAAGCAATGGAACAGCAAAAAAAGCGAACAAGATTTTGTAAAGCTTGTAAGCAATACGTGTATCATGATAGTCGTAATTGTCCCACAAAATCTTCATAA 2256 0.3347 MEMSDDRVDLASASKSLDVVENMSEEWIPICEDESKPIIGKIFDSLEEGEKFYKMYAHSVGFSVRNSSQTKYKNGLKWKYFLCSKEGFKVEKPVTLHGLVISEDSLPRVRKRKLTREGCNAKIAFRRTIDGRYEVAKFYEGHTHALVTPRKKQLLRSARSVNNAHKKLLFSCNKANVGTSKVYQLLKEQVGGYENIGCTQRDFQNNSRDLKELIKDSDAHMFIDNFRRKHEMNHSFFYDYAVDDEGRLKYVFWADGICRKNYSLFGDVISFDTTYSTNKYCMIFAPFTGVNHHRQSVTFGAAFLADEKVDSFVWLFESFLKAMGGHKPTMIITDQDPAMKIAIEKVFNGSSHRFCMWHILKKVSEKVGVSLNVNIDFNNRLKSCVWNSETPEEFESKWKSIISDFKLEENGWLSQMFDIRSMWIPAYFKDIFMAGILRTTSRSESENSFFGNYLNKNLSLVEFWMRFDSAIEAQRHKELLADNDTLHSFPELKLQMDLEKHGREVYTHENFYIFQRELWSACVDCGIEEKKEKGENSLFFIIDNIVVNGNKLSKCREVVYQLSNHIAHCSCKLFESEGMPCRHILFILKGKGLNKIPSHYVVNRWTKLATSRSIFDSDENVFEESSKFESESKLISNAWAQFFKCMHMAGTSKEKLLLIINDGASTESKLGKMKNDIAPTTLDELEVFIGSNVPKEIDIFPPEHSNTKGCGKRIKGGKEKAMEQQKKRTRFCKACKQYVYHDSRNCPTKSS 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07985 751 Pfam FAR1 DNA-binding domain 51 147 IPR004330 -
Vivi2g07985 751 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 31 647 IPR031052 GO:0006355
Vivi2g07985 751 ProSiteProfiles Zinc finger SWIM-type profile. 560 592 IPR007527 GO:0008270
Vivi2g07985 751 SMART 26again6 567 594 IPR006564 GO:0008270
Vivi2g07985 751 Pfam MULE transposase domain 268 362 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07985 Vivi-Chr2 229830204 229832459 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vivi2g07985 FAR1 4.5e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07985 - - mtr:112420857 947.192