Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07915 ATGACACAACCATTCAAAAACACACACACTCTTTTTTCTTCACCACAAACGTTGTCAATGTGTGCTGCAGACATGTCCAACAACAACAATCCCCCTCCTGCCAAAGACTTCTTTCCCTCTCCAGCTCTCTCTCTTAGCCTCGCGGGGATTTTTCGCCATGGTGCTGCAGCGGCGGAGATTGAAGGCGCAACTACCAGTAACATGGAGGTGGAGGAAGGGGAGGAAGGAAGTACTATAGGCGGCGGCGAACGCGTGGAGGAGATTAGCAGTGAGTATTCAGGTCCATCAAAATCGAAATCAGAGGAAGATTTTGAAGGAGATGAACAAGAAGAGGATGATGAAGATGAAGGTGGTGATGGAGACAATAAGAACAAGAAGAAGAAAAGGAAGAAATATCACAGACACACTGCTGAGCAGATCAGATTCATGGAAGCGCTTTTCAAAGAATCACCACATCCTGATGAAAAACAGAGACAACAACTTAGCAAGCAATTAGGACTTGCTCCAAGACAAGTCAAGTTTTGGTTCCAAAATCGTAGAACTCAAATCAAGGCAATACAAGAGAGACATGAAAATTCATTGTTGAAAACAGAAATAGAGAAACTAAGGGACAAAAACAAGACCCTAAGAGAGACCATAAACAAAGCTTGTTGCCCTAATTGTGGGGTACCTACCACAAGCAGAGATGGTTCCATGCCAACTGAAGAACAACAACTTCGTATTGAAAATGCCAAACTCAAATCCGAGGTAGAGAAACTTCGAGCCGCATTAGGAAAATATGCATCTGGAACAATGTCACCTTCATGTTCTACAAGTCATGATCAAGAGAATATGAAAAGTTCTTTGGATTTTTATACTGGAATTTTTGGTCTTGATGAGTCATGGATAATGGATGTGGTGAGCCAAGCAATGGAAGAGCTTATAAAGATGGCTTCAATGGGTGAACCATTGTGGCTACGTAGCTTTGAGACGGGTCGAGAAATATTAAACTATGATGAATATTTGAAGGAATTTGGAGGTGACAATTCAGATGATGGTAGACCAAAGAGATCCATTGAAGCTTCAAGAGATACAGGAGTTGTTTTTGCAGATCTTCATAGGATTGTCCAATGTTTTCTTGATGCTAATCAATGGAAGGAAATGTTTCCATGTTTAATATCTAAGGCTGCGACAGTGGATATAATATGCAAAGGAGAAGGTTCTAACAACAACGGTGTTGCGCAACTGATGTTTGCTGAACTGCAAATGCTAACACCAATGGTGGCCACTAGAGAAGTGTATTTTGTCAGATACTGCAAACAATTAAGTAGTGAAAAATGGGCAATAGTTGATGTATCCATAGACAAAGTAGAAGACAACATTGACATGTCCCTTATGAAATGCAGAAAACGCCCATCTGGTTGCATTATTGAAGATAAGTCAAATGGTCATTGCAAAGTAACATGGGTGGAGCATTTAGAGTGTCAAAGGAGCACAGTTCATTCAATGTTCAGAACCATTGTCAACAGTGGCCTAGCTTTTGGGGCAAGGCATTGGATTGCGACGCTTCAACTTCAATGCGAACGTCTAGTTTTCTTCATGGCAACAAATGTCCCCATGAAAGATTCAACTGGTGTTACTACATTGGCTGGAAGAAAAAGCATTTTGAAGTTGGCACAAAGAATGACATGGAGTTTCTGTCAAGCTATTAGTGCATCAAGCTTCCATACATGGACCAAAGTTACTAGTAAAACTGGAGAAGACATAAGGATCAGCTCTAGAAAGAATTTGAATGATCCTGGTGAACCTCTAGGGTTGATCCTTTGTGCAGTTTCTTCGGTATGGTTGCCTGTATATCATAACGTTCTGTTTGACTTCTTGAGGGATGAAGCTCGTCGAACTGAGTGGGATATCATGTCTAGTGGCGGGGCAGTGCAGTCTATTGCAAATTTAGCCAAAGGACAAGACAGAGGCAATGCAGTAACAATCCAAACGGTTAAATCTAAAGAAAACAATATGTGGATACTCCAAGATAGTTGCACAAACTCTTATGAATCAATGGTGGTATATGCTCCTGTGGACATTACTGGTATTCAGTCTGTGATGACAGGATGTGATTCGAGCAATCTTGCCATACTTCCGTCAGGGTTCTCCATTGTTCCCGATGGTTTAGAGTCGAGGCCAATGGTAATTACTTCCAGGCAGGAGGAGAAAAATACAGAGGGGGGATCTTTGTTTACAATAGCATTTCAGATTCTTACCAATGCTTCTCCTACAGCCAAATTAACAATGGAGTCTGTGGACTCTGTTAACAATCTTGTATCGTGTACATTAAGACACATCAGAACAAGTTTACATTGTGAAGATGGTTAG 2352 0.4124 MTQPFKNTHTLFSSPQTLSMCAADMSNNNNPPPAKDFFPSPALSLSLAGIFRHGAAAAEIEGATTSNMEVEEGEEGSTIGGGERVEEISSEYSGPSKSKSEEDFEGDEQEEDDEDEGGDGDNKNKKKKRKKYHRHTAEQIRFMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKAIQERHENSLLKTEIEKLRDKNKTLRETINKACCPNCGVPTTSRDGSMPTEEQQLRIENAKLKSEVEKLRAALGKYASGTMSPSCSTSHDQENMKSSLDFYTGIFGLDESWIMDVVSQAMEELIKMASMGEPLWLRSFETGREILNYDEYLKEFGGDNSDDGRPKRSIEASRDTGVVFADLHRIVQCFLDANQWKEMFPCLISKAATVDIICKGEGSNNNGVAQLMFAELQMLTPMVATREVYFVRYCKQLSSEKWAIVDVSIDKVEDNIDMSLMKCRKRPSGCIIEDKSNGHCKVTWVEHLECQRSTVHSMFRTIVNSGLAFGARHWIATLQLQCERLVFFMATNVPMKDSTGVTTLAGRKSILKLAQRMTWSFCQAISASSFHTWTKVTSKTGEDIRISSRKNLNDPGEPLGLILCAVSSVWLPVYHNVLFDFLRDEARRTEWDIMSSGGAVQSIANLAKGQDRGNAVTIQTVKSKENNMWILQDSCTNSYESMVVYAPVDITGIQSVMTGCDSSNLAILPSGFSIVPDGLESRPMVITSRQEEKNTEGGSLFTIAFQILTNASPTAKLTMESVDSVNNLVSCTLRHIRTSLHCEDG 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07915 783 Coils Coil 185 212 - -
Vivi2g07915 783 Gene3D - 340 517 IPR023393 -
Vivi2g07915 783 Pfam Homeodomain 129 184 IPR001356 GO:0003677
Vivi2g07915 783 SMART START_1 298 522 IPR002913 GO:0008289
Vivi2g07915 783 FunFam Homeobox-leucine zipper protein HDG1 114 202 - -
Vivi2g07915 783 Gene3D - 116 198 - -
Vivi2g07915 783 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 125 778 IPR042160 -
Vivi2g07915 783 SUPERFAMILY Bet v1-like 293 522 - -
Vivi2g07915 783 SMART HOX_1 128 190 IPR001356 GO:0003677
Vivi2g07915 783 SUPERFAMILY Homeodomain-like 119 187 IPR009057 -
Vivi2g07915 783 FunFam Homeobox-leucine zipper protein GLABRA 2 298 521 - -
Vivi2g07915 783 MobiDBLite consensus disorder prediction 62 135 - -
Vivi2g07915 783 ProSitePatterns 'Homeobox' domain signature. 161 184 IPR017970 GO:0000981|GO:0006355
Vivi2g07915 783 CDD START_ArGLABRA2_like 296 521 - -
Vivi2g07915 783 ProSiteProfiles START domain profile. 289 525 IPR002913 GO:0008289
Vivi2g07915 783 Coils Coil 236 256 - -
Vivi2g07915 783 SUPERFAMILY Bet v1-like 551 775 - -
Vivi2g07915 783 ProSiteProfiles 'Homeobox' domain profile. 126 186 IPR001356 GO:0003677
Vivi2g07915 783 CDD homeodomain 133 184 IPR001356 GO:0003677
Vivi2g07915 783 MobiDBLite consensus disorder prediction 104 118 - -
Vivi2g07915 783 Pfam START domain 302 522 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07915 Vivi-Chr2 228471264 228477014 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g07915 88 782 Homeobox Transcription Factor Family AT1G79840 65.385 0.0 924
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Vivi2g07915 START 1.9e-51 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07915 K09338 - gmx:100809926 1223.76