Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07868 ATGCCTAAGAAGCTTCAAAAAACCCTTCAAGATTACCTCAACAAACTCAAAAACAAAAACCCTCACCCTCAAATCAAGTTAACCAAAATGCTCTCTGGCTGCAAACACCCCAAAACGCCGTCGTTTTCTTTAGATAACGGCAGAAACTTATCATCTAACTCCGTTAACGACGCAGCAACGCTAGCTGACGTTGACCGTTTTCTCTTCGAGAATTTCAAGTCTCTCTATTTCAAAGACGACGACGAAACCGAAAACTCCGTCAAAAGAATCTCCGACGAAAAAAACCACCGCGAACCACCGAAATTCAATTCCTCCTCTTTGCTCGAATCACCGCGATTCGATCGATCACCACCGCCGAATCTCTCCCGATCAGCGCGATTCTTCGTGAAACCGGGAAACTCTGGATCGTTGATGGAAGATGCTTTATCGCTAACAAACAGCGATGATGAAGGTGATTCGAGTAATTTGAATTCATCCTCAACAGAATCGCCATCAAAAGAGGTGGTTAAAGTTCATGATGATCATAATCAGACTCTTCCTGAAAACTGTATTGCTCTGTTATCCTATTCGCCGACTCCTTACGACGAATTCAGGCGATCCATGCAGGAATTGGTGGAATCCAAGTACGGGAAAACTGAACTGAATCAGATGAAAATCGATTGGGATTTCATGGAGGAGATGCTGTTTTGTTACCTGAATCTGAATGAGAAAAAGTCTCATAAGTTTATTTTAAGTGCTTTTGTTGATCTCATCACTGTTTTGCGTCAGAGTCAGAGTCAGAATTCGGAAGCAGCTCCGGCGAAGCCGTGTAGCGTGAGAACCGTTAGGATTGGTAGGGAAGTGAGGAAGAAGAAGACTAAGCAAGTCACCATTGAATTTGGGTCTTAG 888 0.4347 MPKKLQKTLQDYLNKLKNKNPHPQIKLTKMLSGCKHPKTPSFSLDNGRNLSSNSVNDAATLADVDRFLFENFKSLYFKDDDETENSVKRISDEKNHREPPKFNSSSLLESPRFDRSPPPNLSRSARFFVKPGNSGSLMEDALSLTNSDDEGDSSNLNSSSTESPSKEVVKVHDDHNQTLPENCIALLSYSPTPYDEFRRSMQELVESKYGKTELNQMKIDWDFMEEMLFCYLNLNEKKSHKFILSAFVDLITVLRQSQSQNSEAAPAKPCSVRTVRIGREVRKKKTKQVTIEFGS 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07868 295 Pfam Transcriptional repressor, ovate 190 253 IPR006458 -
Vivi2g07868 295 NCBIfam uncharacterized plant-specific domain TIGR01568 184 255 IPR006458 -
Vivi2g07868 295 MobiDBLite consensus disorder prediction 83 166 - -
Vivi2g07868 295 MobiDBLite consensus disorder prediction 138 165 - -
Vivi2g07868 295 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 54 256 IPR038933 GO:0045892
Vivi2g07868 295 MobiDBLite consensus disorder prediction 83 100 - -
Vivi2g07868 295 ProSiteProfiles OVATE domain profile. 186 253 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07868 Vivi-Chr2 227628051 227629528 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Vivi2g07868 Ovate 2.1e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07868 - - lja:Lj3g3v0160750.1 290.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g07868 2 227628051 227629528 Vivi2g07868 2 227628051 227629528 ECH
Vivi2g07868 2 227628051 227629528 Vivi5g00359 5 4831742 4832681 PCT