Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07863 ATGGATGACATTGAGAATGATGCAATTGCAAGGTATCCCCCTAACCCATATGCTGTTAGTCACCCTCATAATCAAGGTTATGGTTATCAGAAACATCCTTTTAGGAATTCTCCTTATTCTCGTCCCGTTGTGAATGAATCCGCCGAAGATTTTAATGGTGGCAATGAAGAAGATGATTATAGGTTAGATGGGAAAGATGATGTTGTGGATGATGAGGAGGAGGAGGATGCCGTTGATCGAAATAGGAGCGTTCGAGTTCCTCTGAATCATGTTGATGAAGATGATGATGTTGATGATGATATGGATGGGGATGGCGATGAAAATGATGATAATGACCAACAAGAAAATCAGGAGTATGGTTATCTGAAACATCCTATGAGGAATAATCCGGATCCCCAGCCATTTGAAAATGAAGGTAACAATGATGGAGATGAAGGAGATGAAGAAGATGAAGAGCGGTTAGTAGGGGAAGATGAAGGTGACGGTGATGAGGATGTTGATCAAAATAACAACTTTCAGCTTTCCCGAAATCATGCTGATGAAGAAGATAACAATGATGGGGATGGGGATGAGGATAGGGATAGGGATGAAGATGACAATGACGGGGATGAGGATAGGGAGGAAAATGGTGATAACAACGACGGTGATAATGACAATAAGCAGAAAAGCTATGCCATCATGAATGAAGATGAATTTGAGTGGCACCCAAAAAAGCAAAAGCTAAAGAGTTTGATGTCAACTTATGAATTTGCAGCTCGGGTGCCGGAACCATCTGCTGCAGCTTCTTCTGCTACTAAACCATCTTTTGGGGCTAGAAACTCGCTTAGTGAGTGGACTGAGAAAGAGACATTTGTTCTTCTTGATGCGTGGGGTGATCGGTTTCTTCAACATGGAAGGAAGAGTCTTCGATCTGATGAATGGCAACAAGTTGCAGAAAAGGTATCAGAAGTTTCAAAAGTTGATAGGACAGATACTCAGTGTAGAAATCGTTTGGATACATTGAAGAAGAAATACAAAAAGGACAAGATTAAGTTTTCGGAAATGGGTGGCGGAGATAAAAAATGGGTTTACTTCAAAAAGATGGATAAGTTAATGTCTTCTCCACCGCAACAAGCCGGTTTCTCTTGTGGTTTGGACTCAAGAGAGAGTGTTTTTTTGAAGCCTAGAGTTTTTGCTAATCATGCAAATGGATTGGATGACACGAGGGATAATCCCGCAAATACCAAATCCATTGGTGTAGAAGGTTTAGAAAGGCCCCGCGCAAAGAAAAGAAGGAAAGGTAGGGGCAGTGACGAGTCTTCTTCCTTCAAATTACTTGCTGATTCCATTCAGAATTTCGGTAAGATTTATGAGAAAATTGAAAATAATAAAAGGCAGCAGATGATGGAGCTGGAAAAGATGAGGATGGATTTCCTCACTGAATTGGAAACACAAAAGAGAGAGATTTTTGAAAAATTGCAGAGTGAGATTTTAAGATTCGAGCAAAGAGATGATTAG 1497 0.4055 MDDIENDAIARYPPNPYAVSHPHNQGYGYQKHPFRNSPYSRPVVNESAEDFNGGNEEDDYRLDGKDDVVDDEEEEDAVDRNRSVRVPLNHVDEDDDVDDDMDGDGDENDDNDQQENQEYGYLKHPMRNNPDPQPFENEGNNDGDEGDEEDEERLVGEDEGDGDEDVDQNNNFQLSRNHADEEDNNDGDGDEDRDRDEDDNDGDEDREENGDNNDGDNDNKQKSYAIMNEDEFEWHPKKQKLKSLMSTYEFAARVPEPSAAASSATKPSFGARNSLSEWTEKETFVLLDAWGDRFLQHGRKSLRSDEWQQVAEKVSEVSKVDRTDTQCRNRLDTLKKKYKKDKIKFSEMGGGDKKWVYFKKMDKLMSSPPQQAGFSCGLDSRESVFLKPRVFANHANGLDDTRDNPANTKSIGVEGLERPRAKKRRKGRGSDESSSFKLLADSIQNFGKIYEKIENNKRQQMMELEKMRMDFLTELETQKREIFEKLQSEILRFEQRDD 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07863 498 MobiDBLite consensus disorder prediction 93 114 - -
Vivi2g07863 498 FunFam trihelix transcription factor ASIL2 278 340 - -
Vivi2g07863 498 MobiDBLite consensus disorder prediction 184 212 - -
Vivi2g07863 498 MobiDBLite consensus disorder prediction 395 435 - -
Vivi2g07863 498 MobiDBLite consensus disorder prediction 78 92 - -
Vivi2g07863 498 Gene3D - 278 340 - -
Vivi2g07863 498 MobiDBLite consensus disorder prediction 63 77 - -
Vivi2g07863 498 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 263 495 IPR044823 -
Vivi2g07863 498 MobiDBLite consensus disorder prediction 213 235 - -
Vivi2g07863 498 MobiDBLite consensus disorder prediction 1 235 - -
Vivi2g07863 498 Coils Coil 450 481 - -
Vivi2g07863 498 MobiDBLite consensus disorder prediction 138 166 - -
Vivi2g07863 498 Pfam Myb/SANT-like DNA-binding domain 277 364 IPR044822 -
Vivi2g07863 498 ProSiteProfiles Myb-like domain profile. 276 335 IPR001005 -
Vivi2g07863 498 MobiDBLite consensus disorder prediction 415 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07863 Vivi-Chr2 227541496 227543760 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g07863 417 496 Trihelix Transcription Factor Family AT3G14180 38.750 9.77e-10 58.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Vivi2g07863 Myb_DNA-bind_4 2.2e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07863 - - psat:127087507 669.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g07863 2 227541496 227543760 Vivi2g07863 2 227541496 227543760 ECH