Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07860 ATGGGCATGAATTGCAACAGAGTAGAACACTTTGAAGAATCCACCATGAAAATCCAAACTGAAATTCCAATTCATCAAGTTCGTTTACCACCACAGCGAACTTCACTCTTCAAACTCAAACAAAGACTCTCTGAAATCTTCTTCCCTGATGATCCTTTACACCGTTTCAAAAACCAACCATCTTTCACTAAGTTTCTTCTTACTCTTCAATTCTTGTTCCCCATTTTTCAATGGGGCTCCAACTATAGCCTCAAACTCCTCCGTTCCGATATCGTCTCCGGCCTCACCATTGCCAGCCTCTCCATTCCCCAGGGGATAAGTTATGCGAAGTTGGCAAACTTGCCACCTATTATTGGATTATATTCAAGTTTTGTGCCTCCATTGATATATGCTTTGCTTGGAAGTTCAAGACATGTTGGAGTTGGACCAGTTTCAATTGCATCATTGGTTATGGGATCAATGTTGAGTGAAAGTGTTTCTTTCACTAAAGATCCAACTCTTTATCTTCAATTGGCTTTCACTGCAACTTTTGTTGCTGGTTTATTCCAAGCTTCCCTTGGCATATTAAGGTTGGGTTTTGTAATTGATTTTCTATCAAAAGCAACATTGGTTGGTTTCATGGCTGGTGCTGCTATCATTGTTTCATTACAACAATTGAAAGGGTTGCTTGGAATTGTGCATTTTACTAACAAGATGCAAATTATTCCTGTTTTGCTCTCTGTTTACAACCAAAAGAATGAGTGGTCATGGCAAACTATTGTTATGGGATTTGGTTTCTTAGCATTCCTTCTCACAACAAGACACATTAGTTTGAGGAAACCAAAACTCTTCTGGGCTTCAGCAGCTGCACCTTTAACATCAGTTATTCTGTCAACAATTTTAGTCTTTCTTCTCAGAAATAAAACTCATCAAATTTCAGTGATTGGACACTTATCAAGGGGTGTTAATCCACCATCAGTAAACCTGTTATACTTCAATGGTCCTTACTTGGCTCTTGCTATCAAAACCGGCATTGTCACTGGGATTCTATCTCTCACTGAAGGAATTGCAGTTGGTAGAACATTTGCAGCACTGAAGAATTACCAAGTGGATGGAAACAAAGAAATGATGGCTATTGGTATAATGAACATAGCTGGTTCTTGCACTTCATGCTATGTCACAACGGGATCGTTTTCTCGAACGGCTGTTAACTACAATGCTGGAGCACAGACTGCTGTTTCTAATATAATCATGGCTTCAGCTGTTCTAGTCACCCTTTTGTTTCTCATGCCGCTCTTTTACTATACGCCAAACGTTGTCTTAGCGACCATCATCATCGCTGCGGTGATTGGACTGATAGATTATCAAGCTGCACATAAACTGTGGAAGGTTGACAAACTTGATTTCTTGGCCTGCATGTGCTCCTTTTTCGGTGTTCTCTTCCTTTCTGTACCTTTAGGCCTCAGTATAGCGGTTGCGATATCAGTCTTCAAGATCCTACTTCATGTCTCGAGACCAAACACTTTGGTTTTGGGGAACATACCAGGAACACAAATATTCCATAACATAAACCAATACAAAGAAGCTTTAAGAGTTCCTTCGTTTCTCATTTTGGCTGTCGAGTCTCCAATCTATTTCGCGAATTCAACTTACCTTCGAGAGAGGATACTGAGATGGGTGCGAGAAGAGGAAGAACGAGTAAAAGAAAATAACGGAAATGCATTGAAGTGCATAATTTTAGACATGACAGCTGTCACAGCAATAGACACAAGTGGACTTGAAACTTTAGGTGAACTTAGAAAGATGCTGGAAAAGAGATCACTTCAGTTTGTGTTGGTAAATCCGGTTGGAAATGTGATGGAGAAGTTACATATGTCGAAGATTTTGGATACCTTTGGATTTAAAGGCGTATATCTCACAGTCGGAGAAGCTTTGGCTGATATTTCGACATCAGAGAAAGCTGAACCTTGA 1950 0.4 MGMNCNRVEHFEESTMKIQTEIPIHQVRLPPQRTSLFKLKQRLSEIFFPDDPLHRFKNQPSFTKFLLTLQFLFPIFQWGSNYSLKLLRSDIVSGLTIASLSIPQGISYAKLANLPPIIGLYSSFVPPLIYALLGSSRHVGVGPVSIASLVMGSMLSESVSFTKDPTLYLQLAFTATFVAGLFQASLGILRLGFVIDFLSKATLVGFMAGAAIIVSLQQLKGLLGIVHFTNKMQIIPVLLSVYNQKNEWSWQTIVMGFGFLAFLLTTRHISLRKPKLFWASAAAPLTSVILSTILVFLLRNKTHQISVIGHLSRGVNPPSVNLLYFNGPYLALAIKTGIVTGILSLTEGIAVGRTFAALKNYQVDGNKEMMAIGIMNIAGSCTSCYVTTGSFSRTAVNYNAGAQTAVSNIIMASAVLVTLLFLMPLFYYTPNVVLATIIIAAVIGLIDYQAAHKLWKVDKLDFLACMCSFFGVLFLSVPLGLSIAVAISVFKILLHVSRPNTLVLGNIPGTQIFHNINQYKEALRVPSFLILAVESPIYFANSTYLRERILRWVREEEERVKENNGNALKCIILDMTAVTAIDTSGLETLGELRKMLEKRSLQFVLVNPVGNVMEKLHMSKILDTFGFKGVYLTVGEALADISTSEKAEP 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07860 649 Pfam Sulfate permease family 87 467 IPR011547 GO:0016020
Vivi2g07860 649 ProSiteProfiles STAS domain profile. 518 641 IPR002645 -
Vivi2g07860 649 SUPERFAMILY SpoIIaa-like 524 640 IPR036513 -
Vivi2g07860 649 Gene3D STAS domain 498 644 IPR036513 -
Vivi2g07860 649 CDD STAS_SulP_like_sulfate_transporter 519 634 - -
Vivi2g07860 649 FunFam Sulfate transporter 31 498 644 - -
Vivi2g07860 649 NCBIfam sulfate permease 74 637 IPR001902 GO:0016020|GO:0055085
Vivi2g07860 649 Pfam STAS domain 519 637 IPR002645 -
Vivi2g07860 649 ProSitePatterns SLC26A transporters signature. 116 137 IPR018045 GO:0008271|GO:0008272
Vivi2g07860 649 PANTHER SULFATE TRANSPORTER 36 641 IPR001902 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07860 Vivi-Chr2 227526868 227530711 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g07860 1 648 Inorganic Solute Cotransporters AT3G15990 75.231 0.0 1023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07860 K17471 - gmx:100812617 1062.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g07860 2 227526868 227530711 Vivi2g07860 2 227526868 227530711 ECH
Vivi2g07860 2 227526868 227530711 Vivi5g00349 5 4724280 4729682 PCT