Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07856 ATGTCATCTATTTGCAAATTCATAGATGGAGTAAAAGCAGCATTTCTAATGGTGGTGGTTCAAATTGCTTATGCTGTTGTTAGCATATTGTACAAATTGGTTGCAGATAATAATGGGATGAGTTTGTGTGTACTTGTGGCTTATCGTTACCTCTTTGCATCAATTTTTATGGTTCCTCTTGCTTACTTTGCTGAGAGGAAGAGCAAACCAAAGATCACTGCAGAAGTTCTTTTTCAAGCTTTTCTTTGTGGATTATTTGGGGCAACCTTACAACAAAATTTATACGTTGAAGCCGTAGTTTTAGCGGGTGTAACATATGCTACGGTCATGTATAATTTTATTCCGGGTGCAACCTTCATCTTAGCCGTCTCTTTCGGATTAGAAAGGTTAAACATTAGAACATTAACCGGAAAAGCCAAGGTGATTGGCACATTAATGGGAATTAGTGGAGCTATGATTCTCACATTCTATAAGAGCACTGAAATTCACCTATGGTCTACTCATGTGAATTTGTTGAAACATCATCTACATCCACAAAATGTTTCTACTAATAATATATGGGGCTCTTCTCTTGCATTGGGCACTTGTATATCATATTCAATATGGTTGATAATTCAGGCTAAAATGAGTGAGAAGTTTCCTTGGCATTATACAAGTGCAGCATTGATGTCAGTGATGGCTTCTATTCAATCAATTATATTTGCATTATTCATGGAAAGAGGTGATTGGAATCAATGGAAGCTTGGTTGGGATATCAAACTTTTCACTGCACTTTTTGCGGGTGTTGTGGCCTCCGGAATAGTTTGGGTTTTGATTGCATGGTGTGTGCGCATAAAAGGTCCACTATATGCTTCAGTTTTCAACCCTCTCTTTCTTGTTCTAGTGGCCATTGGAGGATCTCTCTTATTAGATGAAACACTTTATTTGGGAAGTGTAATAGGATCATTGATCATTGTGATTGGGCTATACATTGTCTTGTGGGGTAAAGGTAGAGAATTGAAGAAAACTATTGAGATTCAACCCTTGGAGATAATAACCACAAAGCTTCAAGATGCTAAAAGTCTTGAGATTGATGATAACATTGTCTTGAAGGAAAACAATTAG 1104 0.3714 MSSICKFIDGVKAAFLMVVVQIAYAVVSILYKLVADNNGMSLCVLVAYRYLFASIFMVPLAYFAERKSKPKITAEVLFQAFLCGLFGATLQQNLYVEAVVLAGVTYATVMYNFIPGATFILAVSFGLERLNIRTLTGKAKVIGTLMGISGAMILTFYKSTEIHLWSTHVNLLKHHLHPQNVSTNNIWGSSLALGTCISYSIWLIIQAKMSEKFPWHYTSAALMSVMASIQSIIFALFMERGDWNQWKLGWDIKLFTALFAGVVASGIVWVLIAWCVRIKGPLYASVFNPLFLVLVAIGGSLLLDETLYLGSVIGSLIIVIGLYIVLWGKGRELKKTIEIQPLEIITTKLQDAKSLEIDDNIVLKENN 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07856 367 PANTHER WAT1-RELATED PROTEIN 14 333 IPR030184 GO:0016020|GO:0022857
Vivi2g07856 367 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 154 - -
Vivi2g07856 367 Pfam EamA-like transporter family 187 326 IPR000620 GO:0016020
Vivi2g07856 367 Pfam EamA-like transporter family 13 154 IPR000620 GO:0016020
Vivi2g07856 367 SUPERFAMILY Multidrug resistance efflux transporter EmrE 225 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07856 Vivi-Chr2 227376332 227379459 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g07856 11 359 Nodulin-like Gene Family AT1G25270 41.477 2.70e-86 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07856 - - tpra:123896693 565.459