Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07852 ATGAATTTCTTGCATCAATGTCAAAATACCGGCTCCGGTGAGGAATCTTTATCTCATCTTTTCTTTTCGTGTAACGTCACCATTTGCATATGGAGAAGGGTGTTTATGTGGCTTGAATTATCCGGATTTTTGTCCTTTGAAGAGTTTGGGGATTTCTTCTATAATTTCCGGAAAATTCCTTGCATTGTTAAGCGTACGATTGTGGGTACCGTTTGGCTTGCTACGGTGTGGTCGATTTGGCTTAAGCGGAATGCGGTGATCTTTGAGAATGAAGTTTTTAGCTTTACCGAATGTATGTCGGATATAGTTTTGAGCTCTTGGAGTTTGGAAAGGTTGAACATTGGAACATTAATAGGGAAGGCCAAGGTGGTTGGCACAATAATGGGAATTAGTGGAGCCATGGTTCTCACATTCTATAAGAGTGTTGAAATTCACCTATGGTCTACACATGTGAATTTGTTGAAACATCATCCACAATCACAAAATGTTTCTTCTAATAATATATGGGGTTCATCTCTTGCATTGGGAACTTGTTTATCATATTCAATATGGTTGATAATTCAGGCTAGGATGAGTGAGAAGTTTCCTTGGCATTATACAAGTACAGCATTGATGTCTGTAATGGCTTCCATTCAATCAATTATATTTGCTTTATGTATGGAAAGAGGTGATTGGAATCAATGGAAGCTTGGTTGGGATATCAAACTTTTCACTGCACTTTTTGCGGGTGTTGTGGTCTCGGGAATAAATTGGATTCTGATTTCATGGTGTGTGCGTATAAAAGGTCCACTTTATGCTTCTGTTTTCAACCCCCTCTTTCTTGTTCTGGTGGCCATTGGAGGATCTCTCCTATTAGATGAAAAACTTTATTTGGGAAGTGTAATAGGATCATTGATAATTGTGATTGGGTTATACATTGTCTTGTGGGGTAAAAGTAAAGAACTGAAGAAAGTTATTGAGCAAAATCAAGTAAAAGAATCAGTCGAGATTCAACCAATGGAGATAATTACTGCAAAGCTTGAAGATGCTACAAATGTTGAGACAGGTAACAATGACATTAAGTCAAGTGGCGTCAAGGAAATAACCATTAAAAATTATGACGCTTGA 1107 0.3776 MNFLHQCQNTGSGEESLSHLFFSCNVTICIWRRVFMWLELSGFLSFEEFGDFFYNFRKIPCIVKRTIVGTVWLATVWSIWLKRNAVIFENEVFSFTECMSDIVLSSWSLERLNIGTLIGKAKVVGTIMGISGAMVLTFYKSVEIHLWSTHVNLLKHHPQSQNVSSNNIWGSSLALGTCLSYSIWLIIQARMSEKFPWHYTSTALMSVMASIQSIIFALCMERGDWNQWKLGWDIKLFTALFAGVVVSGINWILISWCVRIKGPLYASVFNPLFLVLVAIGGSLLLDEKLYLGSVIGSLIIVIGLYIVLWGKSKELKKVIEQNQVKESVEIQPMEIITAKLEDATNVETGNNDIKSSGVKEITIKNYDA 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07852 368 PANTHER WAT1-RELATED PROTEIN 91 320 IPR030184 GO:0016020|GO:0022857
Vivi2g07852 368 SUPERFAMILY Multidrug resistance efflux transporter EmrE 208 312 - -
Vivi2g07852 368 Pfam EamA-like transporter family 169 308 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07852 Vivi-Chr2 227351576 227356782 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g07852 107 330 Nodulin-like Gene Family AT1G25270 43.103 8.00e-60 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07852 - - tpra:123896693 386.341