Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07844 ATGAGGAAGAGTGGCATTATGAAAGCTGGAGAGGTTCCAAGTCGATTGACTCGTGCTCGAGCTGCTGCTTTAAGTGCAACTGGACAGTTGCCACCATTGAAGAAGGTGGCAGAAGAAAGTCAGAAGCATCCCCTAAGAGCCAATTCGAAAAGAGCAGTTTCAGATGATACATATCTGCCGCATAAGAAGAGGGCAATTCTTCATGATGTCACGAACGTTCGCTGTGAAAAAAGTAATAGGAGTTGTTTAAATCCAACTGAAACTCAGGCTAAGAAAAGAAAGCTGAATAAACCCGCTCGACCTGATGTTTCAAAGGAGGTTACATCAGTTGCTATGGAGTTACCACAGATTATTGTTGACTCAAAACCGGTGAAATTACCAGAAATGCGGCTTAGATCATCAGAAGATGTCACGTGTTCAGTTAAGTTGGAAGACAATGAACCGATTAGGCTGAGTGCCAACCATTGTGCTACAAATAACGATCTGCTTCTCAGCCAGACATCTCGAGTATCTGCTCGGCCTTCGATTTCTCAAAAGAAAGTTTCACAAACTGTTGCGGCCGAGAAAGTTAACACTTATGAACTTTTGGGTGTGTCAAAGCATCCAGATGTTGCTGACATAGATGCTGATTTTGAAGATCCTCAACTTTGCAGCCTCTATGCTGCTGATATATACGACCACATGCGTGTTGCTGAGCTGTCGAGAAGGCCTAATCCTAACTTAATGGAAACAGTACAGCAAGATATCACTCCAAGCATGCGCGGGATACTGGTTGATTGGCTTGTGGAGGTTTCTGATGGATACAAATTGCAAGCAAATACACTTTACCTCACTGTATATCTCATTGATTGGTTTCTCTCAAAAAATTTCATTGAAAGACAGAAACTTCAGTTGCTCGGCATCACTTGCATGCTAATTGCCTCAAAGTACGAAGAAATTAACGCCCCCCATGTTGAAGACTTCTGCTTCATCACGGACAACACATACACAAAAGGGCAGGTACTACAGATGGAGTCTCTAGTCCTGAAGTCCACTGCATATCAACTATTTGCTCCTACTACGAAAACTTTCCTCAGGAGATTTCTTCGAGCCGCACAAGCTTCTTACAAGAGACCGAGCATTGAGTTGGAGTACTTGGCGAATTACCTGGCTGAACTAACACTGATGAGCTATGGTTTCTTAAATTTCCTTCCTTCAATGATTGCTGCATCTGCGGTTTTCCTCGCAAGATGGACATTAGATCAGTCAAACCACCCATGGAATCCAACTCTTGAACACTATGCTTCTTACAAAGCATCAGATTTGAAAGCCGCGGTTCTTGCATTACAAGATCTACAACTGAATAGCAATGACTGTCCGTTAACCTCGATCCGCATGAAGTACACACAAGACAATCTCAAATGTGTAGCAACTTTGTCTTCACCAAAATTGCTTGAAACAATGTTTTGA 1449 0.4265 MRKSGIMKAGEVPSRLTRARAAALSATGQLPPLKKVAEESQKHPLRANSKRAVSDDTYLPHKKRAILHDVTNVRCEKSNRSCLNPTETQAKKRKLNKPARPDVSKEVTSVAMELPQIIVDSKPVKLPEMRLRSSEDVTCSVKLEDNEPIRLSANHCATNNDLLLSQTSRVSARPSISQKKVSQTVAAEKVNTYELLGVSKHPDVADIDADFEDPQLCSLYAADIYDHMRVAELSRRPNPNLMETVQQDITPSMRGILVDWLVEVSDGYKLQANTLYLTVYLIDWFLSKNFIERQKLQLLGITCMLIASKYEEINAPHVEDFCFITDNTYTKGQVLQMESLVLKSTAYQLFAPTTKTFLRRFLRAAQASYKRPSIELEYLANYLAELTLMSYGFLNFLPSMIAASAVFLARWTLDQSNHPWNPTLEHYASYKASDLKAAVLALQDLQLNSNDCPLTSIRMKYTQDNLKCVATLSSPKLLETMF 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07844 482 Gene3D - 237 350 - -
Vivi2g07844 482 MobiDBLite consensus disorder prediction 36 54 - -
Vivi2g07844 482 FunFam Mitotic cyclin 6 237 337 - -
Vivi2g07844 482 SUPERFAMILY Cyclin-like 212 348 IPR036915 -
Vivi2g07844 482 CDD CYCLIN_AtCycA-like_rpt2 352 463 - -
Vivi2g07844 482 SUPERFAMILY Cyclin-like 352 477 IPR036915 -
Vivi2g07844 482 PANTHER CYCLINS 169 439 IPR039361 -
Vivi2g07844 482 Pfam Cyclin, C-terminal domain 352 474 IPR004367 -
Vivi2g07844 482 MobiDBLite consensus disorder prediction 78 106 - -
Vivi2g07844 482 Gene3D - 223 471 - -
Vivi2g07844 482 PIRSF Cyclin_A_B_D_E 19 481 IPR046965 GO:0016538|GO:0044772
Vivi2g07844 482 SMART Cyclin_C_2 352 475 IPR004367 -
Vivi2g07844 482 MobiDBLite consensus disorder prediction 25 54 - -
Vivi2g07844 482 Pfam Cyclin, N-terminal domain 223 348 IPR006671 -
Vivi2g07844 482 FunFam Cyclin A1 339 471 - -
Vivi2g07844 482 SMART cyclin_7 259 343 IPR013763 -
Vivi2g07844 482 SMART cyclin_7 356 444 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07844 Vivi-Chr2 227073616 227077507 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g07844 1 482 Core Cell Cycle Gene Families AT1G80370 50.820 4.60e-157 452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07844 K06627 - gmx:100789757 592.038