Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07843 ATGAAACTTCACTCTTCTCTTCTCTTCTTTCATTCCATCTTCCATTTCTACACTCTCTCTTCTTCACTCAACTCAGATGGCTTAGCACTTTTATCATTCAAATCCCACTGGACATCACTTCCTCCTCTCATAAACTCAACATGGAACCCATCTCATTCCACACCATGTTCATGGTCTGGTCTCAAATGCAACTCTTTCCACCGTGTAATCTCTCTCAACCTTTCCTATCTTGATATCTACGGTCAACTAGGACCAGAAATTGCAAACTGCACACAACTCCAACACTTAGACCTTAGGTATAACTACTTTCATGGCCAAGTACCTCACTCTTTCACTAACCTCCATCAACTCAAATATCTTCACCTTTCTACTAATCTTCTCACAGGTCCTTTCCCTCATTTCTTGTCCCAAATCCCTCACCTCAAACTTCTTGATCTCTTTGATAACCAACTTAACGGTTCCATTTCAACTACTATTGCCAACATGACTCATCTCCAAGAATTGTATCTCCAATATAACAACTTCTCTGGTGCAATTCCTTCCTCTATTGGGAACTGTACTCAATTACAAGACTTGTATTTGAATGTTAATCAGTTGGAGGGTGTTCTTCCTTACAGTCTCAACAATCTCAATCATCTTGTTCGTTTTCAAGTTGCCTACAATAAACTAACAGGTACTATTCCATTGGGTTCTTCCGGTTGTAGAAATTTACAGTTTTTGGATATCTCATTCAATGATTTTGGTAGTGGCATTCCGTATAGCATTGGTAATTGTACTGCTTTATCACAATTTGCTGCTGTGAAATCTAACTTGGTTGGAGCTATTCCATCTTCCATTGGTCTGCTCACCAAGCTTTTGATTCTTCGCCTTTGCAAGAATCATTTGTCTGGTAAAATACCTCCTGAAATAGGCAACTGCAAGTCTTTGACTGAGTTGCATTTGTATTCCAACCGACTTGATGGAAAAATTCCAAGTGAGTTGGGAAAACTCAGTGAACTGAGGGACCTTGAACTGTTTTCTAATCAATTGAGTGGCGAAATTCCGCTTGAGATATGGAAGATTCGAGGTCTCGAGCATCTGTTTGTGTATAATAATAGCCTTTCTGGTGAACTTCCTGTGGAGATGACAGAGCTCAAGAACCTTAAAAACATTTCATTGTTTAACAACATGTTCTCTGGAGTCATACCTCAAAGCTTGGGAATTAACAGCAGTTTGGTGCAGTTGGACTTTGTGAATAACAGGTTCACTGGTAACCTTCCTCCAAATCTTTGTTTTGGAAGAAAGTTGAATGTTCTGAATATGGGAATCAATCGACTTCGAGGAAGAATACCTCTCGATGTTGGAAGATGCACAACTTTAAGAAGGGTCATTCTTAAGCAAAACAAATTTACCGGGCCTCTTCCTGATTTTGAAAGGAATACCAATCCGTTATACATGGAGATCAGCCACAACGAGATCAACGGGTCAATTCCATCGAGTTTAGGAAACTGCACGAATCTCACGGATTTAATGTTGTCCTCGAACAAACTTAGCGGGCGTATACCGCCGGAGTTGGGAAGACTTGTTAATCTTCGGACGTTGGATCTTAGTCATAATGACTTAGAAGGTCCTTTGCCTTTTCAGCTCGCAAACTGTACCAAAATGGACAAGTTTGATGTAGGATTTAACTTCCTGAATGGTTCATTGCCGTCGAGTTTGCAAAAGTGGACAAGGCTAAACACACTAGTTTTGAATGAGAATCGTTTTAGTGGCGGCATTCCAGAGTTCTTGTGGGCTTTTGAAGATCTTTCTGAACTACAGCTTGGCGGAAATATGTTTGGAGGGAAAATTCCTACCTCGGTTGGGACATTGCAGAATTTGATCTACGGGTTGAATCTAAGTTCTAATGGCCTGATAGGAGACATACCTGTGGAAATTGGAAAGCTGAAATCTCTACAGATGATGGATCTTTCTCAAAACAATTTGACAGGAAGCATACAAGTTCTTGATGAACTCCCTTCGTTAGTCGAAATCAATCTTTCGAACAATTCTTTTCAGGGTTCCATACCGAAGATGCTAATGAAGCTGTTTAATTCTCGCTTGTCCTCATTTTCGGGGAATCCCGGGCTATGTATCAGTTGTTCACCATCCAGTGGTTTGGTTTGCAACGAAAGCAGCTATGTAAAACCATGTGACAACAACAACAAAATGAATAACAAAGGCCTCAGTAAAATTGCGATTGTGATGATAGCTATAGGATCCTCAATATTTGTTGTTTTGCTGTTGACCGGATTGGTTTATATATTTGTTTATGGCAGAAAATCTAAGCAGCAAGTCCATATTACCGATGACGAAGGTCGTTTGTCCCTTCTTAACAAAGTGATGGAGGCTACATCGAACCTAAGTGATCGGTATATTATCGGCAGAGGAGCCCATGGAGTTGTCTATAAAGCCAATGTAAGTCAAGACAAAGCTTTTGCCATAAAGAAGCTGGCATTTGCTGCCAGCAAAGATAAAAACTTGAGCATGGTTAGAGAAATTCAAACCCTCGGACAAATCAAGCATCGAAATCTTGTCAAATTGGAAAACTTTTGGTTGAGACATGATTACGGTCTAATTATGTATAGCTACATGCCAAATGGAAGCCTTTATGATGTCTTGCATGAAAAGAAGCCAGCACCGCCTTTAGAGTGGAATGTTCGGTATAAGATAGCTATTGGAATTGCTCATGGGTTGGCTTACCTCCATTATGACTGTGATCCTTCTATAGTGCACCGAGATATCAAACCAAACAACATACTTCTAGACTCTGATATGGAGCCTCACATTGCAGATTTCGGTATTGCCAAATTTTTGGACCAGTCCTCTACATCAAATCCTTCCCTATCTGTGCCTGGCACTATCGGTTATATTGCACCAGAGAACGCTTATACAACGGTAAGTAGTAGGGAGTGTGATGTATACAGCTATGGAGTAGTTTTGCTTGAGCTGATAACGAGAAAGAAGGTAGTAGATCCATCGTTTACGGAGGGTACTGATTTAGTGGGTTGGGTTAGATTGTTGTGGAGTGAAACAGGAGAAATTAATCAAATTGTTGATTCAAGCCTTGCAAATGAGTGTCTAGATGCCAATATGATGGAAAATGTTGCAAAAGTGCTTATGATGGCTTTGAGATGTGCTGAGAATGATCCACACAAGAGGCCCAAAATGACAGATGTTACTAAGCAGTTATCAGATTCAAATCCACAGAAGAAGAAAAAAGTAAGAAGGGCTAGTTTTGTAAAAGATTTCTAA 3273 0.4012 MKLHSSLLFFHSIFHFYTLSSSLNSDGLALLSFKSHWTSLPPLINSTWNPSHSTPCSWSGLKCNSFHRVISLNLSYLDIYGQLGPEIANCTQLQHLDLRYNYFHGQVPHSFTNLHQLKYLHLSTNLLTGPFPHFLSQIPHLKLLDLFDNQLNGSISTTIANMTHLQELYLQYNNFSGAIPSSIGNCTQLQDLYLNVNQLEGVLPYSLNNLNHLVRFQVAYNKLTGTIPLGSSGCRNLQFLDISFNDFGSGIPYSIGNCTALSQFAAVKSNLVGAIPSSIGLLTKLLILRLCKNHLSGKIPPEIGNCKSLTELHLYSNRLDGKIPSELGKLSELRDLELFSNQLSGEIPLEIWKIRGLEHLFVYNNSLSGELPVEMTELKNLKNISLFNNMFSGVIPQSLGINSSLVQLDFVNNRFTGNLPPNLCFGRKLNVLNMGINRLRGRIPLDVGRCTTLRRVILKQNKFTGPLPDFERNTNPLYMEISHNEINGSIPSSLGNCTNLTDLMLSSNKLSGRIPPELGRLVNLRTLDLSHNDLEGPLPFQLANCTKMDKFDVGFNFLNGSLPSSLQKWTRLNTLVLNENRFSGGIPEFLWAFEDLSELQLGGNMFGGKIPTSVGTLQNLIYGLNLSSNGLIGDIPVEIGKLKSLQMMDLSQNNLTGSIQVLDELPSLVEINLSNNSFQGSIPKMLMKLFNSRLSSFSGNPGLCISCSPSSGLVCNESSYVKPCDNNNKMNNKGLSKIAIVMIAIGSSIFVVLLLTGLVYIFVYGRKSKQQVHITDDEGRLSLLNKVMEATSNLSDRYIIGRGAHGVVYKANVSQDKAFAIKKLAFAASKDKNLSMVREIQTLGQIKHRNLVKLENFWLRHDYGLIMYSYMPNGSLYDVLHEKKPAPPLEWNVRYKIAIGIAHGLAYLHYDCDPSIVHRDIKPNNILLDSDMEPHIADFGIAKFLDQSSTSNPSLSVPGTIGYIAPENAYTTVSSRECDVYSYGVVLLELITRKKVVDPSFTEGTDLVGWVRLLWSETGEINQIVDSSLANECLDANMMENVAKVLMMALRCAENDPHKRPKMTDVTKQLSDSNPQKKKKVRRASFVKDF 1090
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07843 1090 ProSiteProfiles Protein kinase domain profile. 794 1077 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g07843 1090 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 232 323 - -
Vivi2g07843 1090 ProSitePatterns Serine/Threonine protein kinases active-site signature. 916 928 IPR008271 GO:0004672|GO:0006468
Vivi2g07843 1090 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 138 230 - -
Vivi2g07843 1090 Pfam Leucine rich repeat 92 151 IPR001611 GO:0005515
Vivi2g07843 1090 Pfam Leucine rich repeat 624 677 IPR001611 GO:0005515
Vivi2g07843 1090 Pfam Leucine rich repeat 480 534 IPR001611 GO:0005515
Vivi2g07843 1090 SUPERFAMILY RNI-like 272 701 - -
Vivi2g07843 1090 Gene3D Phosphorylase Kinase; domain 1 762 870 - -
Vivi2g07843 1090 SUPERFAMILY Protein kinase-like (PK-like) 777 1070 IPR011009 -
Vivi2g07843 1090 Gene3D Ribonuclease Inhibitor 23 178 IPR032675 -
Vivi2g07843 1090 Gene3D Ribonuclease Inhibitor 179 277 IPR032675 -
Vivi2g07843 1090 SMART serkin_6 794 1077 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g07843 1090 FunFam Leucine-rich repeat receptor-like kinase 28 137 - -
Vivi2g07843 1090 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 762 870 - -
Vivi2g07843 1090 ProSitePatterns Protein kinases ATP-binding region signature. 800 823 IPR017441 GO:0005524
Vivi2g07843 1090 Pfam Leucine rich repeat N-terminal domain 24 64 IPR013210 -
Vivi2g07843 1090 Gene3D Ribonuclease Inhibitor 287 450 IPR032675 -
Vivi2g07843 1090 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 325 423 - -
Vivi2g07843 1090 Gene3D Transferase(Phosphotransferase) domain 1 871 1088 - -
Vivi2g07843 1090 ProSiteProfiles Leucine-rich repeat profile. 644 666 IPR001611 GO:0005515
Vivi2g07843 1090 SUPERFAMILY RNI-like 71 392 - -
Vivi2g07843 1090 Gene3D Ribonuclease Inhibitor 470 730 IPR032675 -
Vivi2g07843 1090 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 476 566 - -
Vivi2g07843 1090 Pfam Protein kinase domain 799 1068 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g07843 1090 SMART LRR_typ_2 330 354 IPR003591 -
Vivi2g07843 1090 SMART LRR_typ_2 521 545 IPR003591 -
Vivi2g07843 1090 SMART LRR_typ_2 187 209 IPR003591 -
Vivi2g07843 1090 SMART LRR_typ_2 665 689 IPR003591 -
Vivi2g07843 1090 SMART LRR_typ_2 162 186 IPR003591 -
Vivi2g07843 1090 SMART LRR_typ_2 282 306 IPR003591 -
Vivi2g07843 1090 FunFam Serine/threonine-protein kinase-like protein CCR4 871 1088 - -
Vivi2g07843 1090 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 427 713 - -
Vivi2g07843 1090 MobiDBLite consensus disorder prediction 1057 1090 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07843 Vivi-Chr2 227053124 227056642 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g07843 21 1072 Receptor kinase-like Gene Family AT1G73080 50.414 0.0 1014
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Vivi2g07843 Pkinase 6.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07843 - - gmx:100778035 1462.97