Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07842 ATGAAACTTCACTCCTCTCTTCTCTTCTTTTCTTCCATCTTCCATTTCTACACTCTTTCTTCTTCACTCAACTCAGATGGCTTAGCACTTCTATCATTCAAAACCCACTGGACATCACTTCCACCTCTCATAAACTCAACATGGAACCCATCTCATTCCACACCATGTTCATGGGCTGGTCTCAAATGCAACTCTTTCCACCGTGTAATCTCTCTCAACCTTTCCTATCTTGATATCAACGGTCAACTAGGACCAGAAATTGCTAACTGCACACAACTTCAACACCTAGACCTTAGTTACAACTACTTCAATGGCCAAATACCTCAATCTTTCACTAACCTTCACAATCTCAAATACCTTGATCTTTCTGTTAATGTTCTCACAACTCCATTTCCTCATTTCTTGTCTCAAATCCCTCTCCTTAAAGTTCTTGATCTCTCTTATAACCAGCTTCACGGTTCCATTTCAACTACTATTGCCAACATGACTCATCTCCAAGAATTGTACCTCAAATATAACAACTTCTCTGGTTCAATTCCTTCCTCTATTGGGAACTGTACTCAGTTACAAGACTTGTATTTGAATGATAATCAGTTGGAGGGTGTTCTTCCTTACAGTCTCAACAATCTCAACCAACTTCTTAACTTTGATGTTGCCAACAATAAACTAACAGGTACTATTCCTTTGGGTTCTTCTGGTTGTGGAAATTTACAGTTTTTGGATATCTCATTCAATGATTTTGGTAGTGAAATTCCATATAGTATTGGTAATTATACTGCTTTATCAAAATTTGCTGCTGTGAAATCTAACTTGGTTGGACCTATTCCATCTTCCATTGGTCTGCTAACCAAGCTTTCGATTCTTCGCCTTTCGGAGAATCATTTGTCTGGAGAAATACCTTCTGAAATAGGCAACTGTAAGTCTTTGACTGAATTGCATTTGTATTCCAACCGACTCGATGGAAAGATTCCGTGTGAATTGGGAAAACTCAGTGAATTAAGAGACCTTGAACTGTTTTCTAATCAATTGAGAGGCGAAATTCCGCTCGAGATATGGAAGATTCGAGGTCTCGAGTATCTGTTTGTGTATAATAATAGCCTTTCTGGTGAACTTCCTGTGGAGATGACAGAGCTCAAGAACCTTAAGAACATTTCATTGTTTAACAACATGTTCTCTGGAGTCATACCTCAAAGCTTGGGAATTAACAGCAGTTTGGTGCAGTTGGACTTTGTGAATAATAGGTTCACTGGGAACCTTCCACCAAATCTTTGTTATGGAAGAAAGTTGAGTGTTTTGAATATGGGAATCAATCAGCTTCAAGGTAGAATACCTCTTGATGTTGGAAGATGCACAACTCTAAGAAGGGTCATTCTTAAACAAAACAAATTTACCGGGCCTCTCCCGGAGTTTGAAAGGAATACCAATCTGTTATACATGGAGATCAGCAACAATGAAATCAACGGATCAATTCCGTCGAGCTTGGGAAACTGCACGAATCTCACGGATTTAATGTTGTCTATGAATAAACTTAGTGGGAGTATACCACCGGAGTTAGGAAGCCTTGTGAATCTTCGGACACTGAATCTTGCTCATAATGACTTAGAAGGTCCTTTGCCTTTTCAGCTCGCAAACTGTACCAAAATGGACAAGTTTGATGTGGGATTTAATTTCCTGAATGGTTCATTGCCGTCGAGTTTGCAGAAGTGGACAAAGCTAAACACACTAGTTTTGAATGAGAATCGTTTTAGTGGCGGAATTCCAGAGTTCTTGTCGGCTTTTAAAGATCTTTCGGAACTACAGCTTGGGGGCAATATGTTTGGAGGGAAAATTCCTAACTCGGTTGGGACATTGCAGAATTTGATCTACGGGTTGAATCTAAGTTCTAATGGGCTGATAGGAGACATACCTGTGGAAATTGGAAAGCTGAAAAGTTTACTAATGATGGATCTTTCTCGTAACAATTTGACAGGAAGCATACAAGTTCTTGATGACCTCCCTTCATTAGTCGAAATCAGTATTTCGAACAATTCTTTTCAGGGTCCCGTACCGAAAATGCTAATGAAGCGGTTTAATTATCGCTTGTCATCATTTTCGGGGAATCCCGGGCTATGTATCAGTTGTTCACCATCCAGTGGCTTTGTTTGCAACGAAAGCAGCTACGTAAAACCATGTGACAACAACAACAAACCTATGAGTAACAAAGGCCTCAGTAAAGTTGCAATTGTGATGATAGCGATAGGATCCTCAATATTTGTTGTTTTGCTGTTGATGGGATTAGTTTATATCTTTGGCAGAAAATCTAAGCAGCAAGTCCATATCACCGATAATGGAGGTCCCTCGTCCCTTCTTAACAAAGTCATGGAGGCTACATCGAATCTAAGTGATCGGTATATTATTGGTAGAGGAGCCCATGGAGTTGTCTATAAAGCCCTTGTAAACCAAGACAAAGCTTTTGCTGTAAAGAAGCTAGCATTTGCTGCCAGCAAAGGTAAGAACTTGAGCATGGTTAGAGAAATTCAAACCCTCGGACAAATCAAGCATCGTAATCTTGTCAAATTGGAAAACTTTTGGTTGAGACATGATTATGGTCTAATTCTGTATAGCTACATGCCAAATGGAAGCCTTTATGATGTCTTGCATGAAAAGAAGCCAGCACCGTCTTTAGAGTGGAATGTTCGGTATAAGATAGCTATTGGAATTGCTCATGGGTTGACTTACCTCCATTATGACTGCGATCCTCCCATTGTGCACCGAGATATCAAACCAAGCAACATACTTCTAGACTCTGATATGGTGCCTCACATTGCAGACTTCGGTATTGCCAAACTTTTGGACCAGTCCTCTACATCAAATCCTTCATCATCCGTGCCTGGCACAATTGGTTATATTGCACCAGAGAACGCTTATACAACGGTAAGTAGTAGGGAGTGTGATGTATACAGCTATGGAGTAGTTTTGCTTGAGCTGATAACGAGAAAGAAGGTAGTAGATTCATCGTTTCCGGAGGGTACTGATTTAGTGGGTTGGGTTAGATTGTTGTGGAGTGAAACAGGAGAAATTAATCAAATTGTTGATTCAAGCCTTGCAAATGAGTGTCTAGATACCAATATAATGGAAAATGTTGCAGAAGTGCTTATGGTGGCTTTGAGATGTGTTGAGAATGATCCACATAAGAGGCCCAAAATGACAGATGTTACTAAGCAGTTATCAGATTCAAATCCACAGAAAAAAAAGGTAAGAAGGGCTAGTTTTGTAAAAGATTTCTAA 3267 0.3976 MKLHSSLLFFSSIFHFYTLSSSLNSDGLALLSFKTHWTSLPPLINSTWNPSHSTPCSWAGLKCNSFHRVISLNLSYLDINGQLGPEIANCTQLQHLDLSYNYFNGQIPQSFTNLHNLKYLDLSVNVLTTPFPHFLSQIPLLKVLDLSYNQLHGSISTTIANMTHLQELYLKYNNFSGSIPSSIGNCTQLQDLYLNDNQLEGVLPYSLNNLNQLLNFDVANNKLTGTIPLGSSGCGNLQFLDISFNDFGSEIPYSIGNYTALSKFAAVKSNLVGPIPSSIGLLTKLSILRLSENHLSGEIPSEIGNCKSLTELHLYSNRLDGKIPCELGKLSELRDLELFSNQLRGEIPLEIWKIRGLEYLFVYNNSLSGELPVEMTELKNLKNISLFNNMFSGVIPQSLGINSSLVQLDFVNNRFTGNLPPNLCYGRKLSVLNMGINQLQGRIPLDVGRCTTLRRVILKQNKFTGPLPEFERNTNLLYMEISNNEINGSIPSSLGNCTNLTDLMLSMNKLSGSIPPELGSLVNLRTLNLAHNDLEGPLPFQLANCTKMDKFDVGFNFLNGSLPSSLQKWTKLNTLVLNENRFSGGIPEFLSAFKDLSELQLGGNMFGGKIPNSVGTLQNLIYGLNLSSNGLIGDIPVEIGKLKSLLMMDLSRNNLTGSIQVLDDLPSLVEISISNNSFQGPVPKMLMKRFNYRLSSFSGNPGLCISCSPSSGFVCNESSYVKPCDNNNKPMSNKGLSKVAIVMIAIGSSIFVVLLLMGLVYIFGRKSKQQVHITDNGGPSSLLNKVMEATSNLSDRYIIGRGAHGVVYKALVNQDKAFAVKKLAFAASKGKNLSMVREIQTLGQIKHRNLVKLENFWLRHDYGLILYSYMPNGSLYDVLHEKKPAPSLEWNVRYKIAIGIAHGLTYLHYDCDPPIVHRDIKPSNILLDSDMVPHIADFGIAKLLDQSSTSNPSSSVPGTIGYIAPENAYTTVSSRECDVYSYGVVLLELITRKKVVDSSFPEGTDLVGWVRLLWSETGEINQIVDSSLANECLDTNIMENVAEVLMVALRCVENDPHKRPKMTDVTKQLSDSNPQKKKVRRASFVKDF 1088
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07842 1088 Pfam Protein kinase domain 798 1067 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g07842 1088 Gene3D Ribonuclease Inhibitor 23 179 IPR032675 -
Vivi2g07842 1088 ProSitePatterns Protein kinases ATP-binding region signature. 799 822 IPR017441 GO:0005524
Vivi2g07842 1088 SMART LRR_typ_2 138 161 IPR003591 -
Vivi2g07842 1088 SMART LRR_typ_2 330 354 IPR003591 -
Vivi2g07842 1088 SMART LRR_typ_2 521 545 IPR003591 -
Vivi2g07842 1088 SMART LRR_typ_2 187 209 IPR003591 -
Vivi2g07842 1088 SMART LRR_typ_2 282 306 IPR003591 -
Vivi2g07842 1088 SMART LRR_typ_2 162 186 IPR003591 -
Vivi2g07842 1088 ProSiteProfiles Protein kinase domain profile. 793 1085 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g07842 1088 Pfam Leucine rich repeat 92 151 IPR001611 GO:0005515
Vivi2g07842 1088 Pfam Leucine rich repeat 624 677 IPR001611 GO:0005515
Vivi2g07842 1088 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 232 323 - -
Vivi2g07842 1088 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 427 713 - -
Vivi2g07842 1088 Gene3D Ribonuclease Inhibitor 180 277 IPR032675 -
Vivi2g07842 1088 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 325 423 - -
Vivi2g07842 1088 MobiDBLite consensus disorder prediction 1059 1079 - -
Vivi2g07842 1088 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 761 869 - -
Vivi2g07842 1088 Pfam Leucine rich repeat N-terminal domain 24 64 IPR013210 -
Vivi2g07842 1088 SUPERFAMILY Protein kinase-like (PK-like) 777 1069 IPR011009 -
Vivi2g07842 1088 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 199 327 - -
Vivi2g07842 1088 ProSitePatterns Serine/Threonine protein kinases active-site signature. 915 927 IPR008271 GO:0004672|GO:0006468
Vivi2g07842 1088 Gene3D Phosphorylase Kinase; domain 1 761 869 - -
Vivi2g07842 1088 FunFam Leucine-rich repeat receptor-like protein kinase 23 181 - -
Vivi2g07842 1088 SUPERFAMILY L domain-like 23 296 - -
Vivi2g07842 1088 SMART serkin_6 793 1076 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g07842 1088 Gene3D Ribonuclease Inhibitor 284 448 IPR032675 -
Vivi2g07842 1088 Gene3D Transferase(Phosphotransferase) domain 1 870 1086 - -
Vivi2g07842 1088 Gene3D Ribonuclease Inhibitor 449 728 IPR032675 -
Vivi2g07842 1088 SUPERFAMILY RNI-like 347 699 - -
Vivi2g07842 1088 FunFam Serine/threonine-protein kinase-like protein CCR4 870 1086 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07842 Vivi-Chr2 226988608 226992307 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g07842 21 1071 Receptor kinase-like Gene Family AT1G73080 51.103 0.0 1025
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Vivi2g07842 Pkinase 2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07842 - - gmx:100778035 1459.51