Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07776 ATGAATTTTCTTACTCTCTTCATTACCATTTCTGTTTGCTCAATAATTCTCAATGCTAATGCTCAATCTCAACCTCAAGCTCAATCTCCAGGAAATCAAGATGTTAGAATTGTGCATCACCAGAATTTGAATAAGAGAATTCTACTAGCATTGATTGCTTGTTCTGCTCTTCTTGCTGGAATCTTCATCTTCTTATTGTTTTTCTTCTTCCGGCGACATAAAAAGTTAACAATCTCCGCAAGTAAAAGCCGAGGAACCATAGAGGCTGCAAAAAGGGAAAAGGAAAACTTAAGTTCTGTTAGTGCGAAACTTAACTACTCGAGAATGGCTGATAAGCAGAGTTCGATTGCTATTTTCGACTTTCAATTGTTAGAAGGTGCAACAAACAACTTTTCCAGAGATAATATTATGGGAGAGAGTGGTTCTAGAATTGTTTACAGAGCTCGTTTCGATGAACATTTTAAGGCTGCTGTGAAGAAAGCAGACAGTGATGCGGATAGAGAATTTGAGAATGAAGTGAGTTTGTTGAGCAAGATTCGGCATCAGAATATCATAAAACTCCTAGGCTATTGTATTCACGGTGAATCGAGGTTTCTTGTTTACGAGTTCATGGAAAGTGGTTCTCTGGAAACTCAATTGCATGGTCCTACTCGCGGATCGTCTTTAACTTGGTATATCCGGTTAAGAATCGCAATTGATGTTGCTAGAGCATTAGAATATCTCCACGAAAACTCCAATCCTCCTGTGGTTCATAGAGACTTAAAATCTTCCAATATTCTTCTGGATTCTGATTTTAATGCCAAGCTATCAGATTTTGGACTCGCTGTAGCTTCTGGTGTGCAACACAAGAACATGAAAATGTCGGGAACTTTAGGCTATGTGGCACCCGAGTACATATCACACGGCAAACTAACTGATAAGAGCGATGTCTATGCTTTCGGGGTTGTACTTCTAGAACTTCTTACCGGAAGAAAACCGATGGAGAACATGTCTTCAGACCAATATCAATCTTTGGTTTCATGGGCCATGCCTCAGCTAACCGACAGATCAAAGCTTCCGAGTATTCTGGATCCTGTTATCCAAAACACAATGGATTTGAAGCATCTATATCAGGTCGCTGCAGTGGCTGTGCTATGTGTGCAAGCAGAACCAAGTTACAGACCACTTATAACAGATGTCTTGCACTCTCTCATTCCTTTGGTACCCTTAGAGCTTGGAGGCTCACTCAGAGTTACAGAACCAATCGGCTCGGAGAATTTTCAATGA 1266 0.4044 MNFLTLFITISVCSIILNANAQSQPQAQSPGNQDVRIVHHQNLNKRILLALIACSALLAGIFIFLLFFFFRRHKKLTISASKSRGTIEAAKREKENLSSVSAKLNYSRMADKQSSIAIFDFQLLEGATNNFSRDNIMGESGSRIVYRARFDEHFKAAVKKADSDADREFENEVSLLSKIRHQNIIKLLGYCIHGESRFLVYEFMESGSLETQLHGPTRGSSLTWYIRLRIAIDVARALEYLHENSNPPVVHRDLKSSNILLDSDFNAKLSDFGLAVASGVQHKNMKMSGTLGYVAPEYISHGKLTDKSDVYAFGVVLLELLTGRKPMENMSSDQYQSLVSWAMPQLTDRSKLPSILDPVIQNTMDLKHLYQVAAVAVLCVQAEPSYRPLITDVLHSLIPLVPLELGGSLRVTEPIGSENFQ 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07776 421 Pfam Protein tyrosine and serine/threonine kinase 148 364 IPR001245 GO:0004672|GO:0006468
Vivi2g07776 421 CDD STKc_IRAK 137 400 - -
Vivi2g07776 421 SUPERFAMILY Protein kinase-like (PK-like) 107 397 IPR011009 -
Vivi2g07776 421 ProSiteProfiles Protein kinase domain profile. 131 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g07776 421 Gene3D Phosphorylase Kinase; domain 1 89 203 - -
Vivi2g07776 421 SMART serkin_6 131 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g07776 421 ProSitePatterns Serine/Threonine protein kinases active-site signature. 249 261 IPR008271 GO:0004672|GO:0006468
Vivi2g07776 421 PANTHER OS01G0750732 PROTEIN 24 399 - -
Vivi2g07776 421 FunFam probable receptor-like protein kinase At1g80640 204 402 - -
Vivi2g07776 421 Gene3D Transferase(Phosphotransferase) domain 1 204 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07776 Vivi-Chr2 225663323 225666296 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g07776 21 343 Receptor kinase-like Gene Family AT1G80640 46.364 1.02e-101 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Vivi2g07776 PK_Tyr_Ser-Thr 7.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07776 - - gmx:100811188 633.254