Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07743 ATGTTTCATTTAGCATTGTTTATTAGTCTTTTTTATGTTGGTAGAGGCATGGATTGTGGTGGAAATCATGTTTCAAATACCATCTATGTTGACCAACAAGGTAAAGGAAATTTTAAAACAATTCAAGCTGCCATTGATTCTATCAAGAATCAAAATGATAAATGGATTGTGATTAATATAAGTTTTGGCACATACAAGGAAAAAGTTCATATACCTATAGAAAAGCCATGCATTGTTTTAAAAGGAGCAGGTAGAGGTAGAAAAGCTACAACCATTACTTATGATGATTCAGCTGAACATGATGGCACATCAATGAGTGCTTCTTTCATTTCATCTCCTCCTAATGTGATTGTCACTGGCATTCAATTTGAGAACACATTTGGAACTAATTCACCAGCAGTAGCAGCTAATTTTTATGGTGATAAATCAGCCATATTTGATTCTAGTTTTATTGGTTATCAAGACACGTTGCTCGTATCAAGTGGACGTTCTTACTTTAAAAATTGTTATATTCAAGGGGAAGTCGATTTTATTTGTGGTTCTGGACAATCTTATTTCGAGAATTGTGTGATGAATGCGACACAAGGGCAAAACAAACCACCTGGTTTTGTTACAGCACAAAAGCGAGACACACCAAATGGAAAAGAAGGTTTTGTTTTTAAAGGATGTTCTGTTATTGGAAATGGTCAAGTGAATCTAGGAAGACCATGGGGCTCTTACTCCAGAGTCATATTTTTGGATTCATATTTTGCATCAGTCGTAATTCCTAAAGGCTGGGACTCTTGGAATCAACAAAGTCATGTAAAAGACATCACATTTGCAGAAATTAATTGTAAGGGACCAGGAGCTGATACTAAGAATCGTGTTGATTGGATCAAGAAACCAGAGGACATTAAAATAAGTGAATATACTTATTCGCCTTTCATAAATTCAGATGGATGGCTTAACAACTTACCTAGTGTGTAA 966 0.3509 MFHLALFISLFYVGRGMDCGGNHVSNTIYVDQQGKGNFKTIQAAIDSIKNQNDKWIVINISFGTYKEKVHIPIEKPCIVLKGAGRGRKATTITYDDSAEHDGTSMSASFISSPPNVIVTGIQFENTFGTNSPAVAANFYGDKSAIFDSSFIGYQDTLLVSSGRSYFKNCYIQGEVDFICGSGQSYFENCVMNATQGQNKPPGFVTAQKRDTPNGKEGFVFKGCSVIGNGQVNLGRPWGSYSRVIFLDSYFASVVIPKGWDSWNQQSHVKDITFAEINCKGPGADTKNRVDWIKKPEDIKISEYTYSPFINSDGWLNNLPSV 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07743 321 Pfam Pectinesterase 28 311 IPR000070 GO:0030599|GO:0042545
Vivi2g07743 321 Gene3D - 21 319 IPR012334 -
Vivi2g07743 321 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 23 316 - -
Vivi2g07743 321 FunFam Pectinesterase 22 319 - -
Vivi2g07743 321 SUPERFAMILY Pectin lyase-like 24 317 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07743 Vivi-Chr2 225172873 225174360 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g07743 6 267 Carbohydrate Esterase AT2G19150 46.494 2.31e-69 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07743 - - tpra:123922273 373.244