Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07716 ATGGCTTTTTTCAAGGTTTTTTGTTGCGGAATTGCTTCGGATCGCAGCGGACGTGGGAAGAAACAACCTCCGTGGCGGGTGTTTTCTTTGAAGGAATTACACTCGGCTACGAATAATTTCAACTATGACAACAAACTTGGCGAAGGAGGGTTCGGAAGTGTGTACTGGGGCCAGCTTTGGGATGGATCACAAATTGCAGTGAAAAGATTGAAAGTTTGGAGCAACAAAGCCGACATGGAATTTGCTGTTGAAGTTGAGATATTGGCAAGAGTGCGACACAAGAATCTTCTTAGTCTACGTGGCTATTGTGCTGAAGGCCAGGAACGGCTAATTGTATACGACTATATGCCGAATTTGAGCCTACTCTCTCATCTTCACGGACAGCACTCAACAGAAAGCCTCCTTGATTGGAATCGACGGATGAATATTGCAATCGGGTCTGCTGAGGGAATTTTATATCTTCACGTCCAAGCAACACCGCATATCATCCATAGAGACGTTAAAGCGAGCAACGTGTTGCTGGATTCAGATTTCCAAGCACGTGTTGCTGATTTCGGTTTTGCCAAGTTGATTCCCGACGGAGCTACGCACGTGACTACAAGAGTTAAAGGAACCCTTGGCTACCTTGCACCAGAATATGCTATGCTAGGTAAAGCAAACGAGAGCTGTGACGTCTACAGTTTCGGTATTCTCCTTCTAGAACTCGCTAGCGGCAAAAAACCACTTGAAAAACTAAGTTCGTCAGTGAAACGATCGATAAATGATTGGGCATTGCCGTTAGCTTGTGAGAAAAAATTTAGTGAACTGGCGGATCCAAGACTTAACGGTGACTATTCTGAGGACGAGCTTAAAAGGGTTGTATTGGTTGCTTTAGTATGTGCTCAGAATCAACCGGAGAAGAGACCAACGATGCTCGAGGTGGTGGAACTTCTGAAAGGTGAGTCGAAAGAGAAGGTATCGCAGTTGGAGAATAATGAACTGTTTAAGAACCCTCTTGCTGTTGGAAATAATGATAATGAGATATTCGTATCAGCTGCTGAAGGGAGTTCAGACTTCATCTCAGAAGAGAAGGATTCCAAACATGAGATGGAAGAGAATAAAGAACCATGA 1110 0.4423 MAFFKVFCCGIASDRSGRGKKQPPWRVFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKADMEFAVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNLSLLSHLHGQHSTESLLDWNRRMNIAIGSAEGILYLHVQATPHIIHRDVKASNVLLDSDFQARVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKANESCDVYSFGILLLELASGKKPLEKLSSSVKRSINDWALPLACEKKFSELADPRLNGDYSEDELKRVVLVALVCAQNQPEKRPTMLEVVELLKGESKEKVSQLENNELFKNPLAVGNNDNEIFVSAAEGSSDFISEEKDSKHEMEENKEP 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07716 369 Gene3D Transferase(Phosphotransferase) domain 1 116 329 - -
Vivi2g07716 369 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672|GO:0006468
Vivi2g07716 369 SUPERFAMILY Protein kinase-like (PK-like) 22 311 IPR011009 -
Vivi2g07716 369 ProSitePatterns Protein kinases ATP-binding region signature. 46 68 IPR017441 GO:0005524
Vivi2g07716 369 ProSiteProfiles Protein kinase domain profile. 40 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g07716 369 PANTHER OS01G0253100 PROTEIN 21 318 - -
Vivi2g07716 369 Gene3D Phosphorylase Kinase; domain 1 13 115 - -
Vivi2g07716 369 MobiDBLite consensus disorder prediction 347 369 - -
Vivi2g07716 369 FunFam PTI1-like tyrosine-protein kinase At3g15890 116 327 - -
Vivi2g07716 369 Pfam Protein kinase domain 41 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g07716 369 CDD STKc_IRAK 46 313 - -
Vivi2g07716 369 FunFam PTI1-like tyrosine-protein kinase At3g15890 12 115 - -
Vivi2g07716 369 MobiDBLite consensus disorder prediction 351 369 - -
Vivi2g07716 369 SMART serkin_6 40 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g07716 369 Coils Coil 305 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07716 Vivi-Chr2 224849262 224851816 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g07716 28 314 Trihelix Transcription Factor Family AT1G70460 50.515 4.05e-93 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Vivi2g07716 Pkinase 4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07716 - - gmx:100788153 665.225