Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07715 ATGGCTTTTTTCAAGGTTTTTTGTTGCGGAATTGCTTCGGATCGCGGACGTGGGAAGAAACAACCTCCGTGGCGGGTGTTTTCTTTGAAGGAATTACACTCGGCTACGAATAATTTCAACTATGACAACAAACTTGGCGAAGGAGGGTTCGGAAGTGTGTACTGGGGCCAGCTTTGGGATGGATCACAAATTGCAGTGAAAAGATTGAAAGTTTGGAGCAACAAAGCCGACATGGAATTTGCTGTTGAAGTTGAGATATTGGCAAGAGTGCGACACAAGAATCTTCTTAGTCTACGTGGCTATTGTGCTGAAGGCCAGGAACGGCTAATTGTATACGACTATATGCCGAATTTGAGCCTACTCTCTCATCTTCACGGACAGCACTCAACAGAAAGCCTCCTTGATTGGAATCGACGGATGAATATTGCAATCGGGTCTGCTGAGGGAATTTTATATCTTCACGTCCAAGCAACACCGCATATCATCCATAGAGACGTTAAAGCGAGCAACGTGTTGCTGGATTCAGATTTCCAAGCACGTGTTGCTGATTTCGGTTTTGCCAAGTTGATTCCCGACGGAGCTACGCACGTGACTACAAGAGTTAAAGGAACCCTTGGCTACCTTGCACCAGAATATGCTATGCTAGGTAAAGCAAACGAGAGCTGTGACGTCTACAGTTTCGGTATTCTCCTTCTAGAACTCGCTAGCGGCAAAAAACCACTTGAAAAACTAAGTTCGTCAGTGAAACGATCGATAAATGATTGGGCATTGCCGTTAGCTTGTGAGAAAAAATTTAGTGAACTGGCGGATCCAAGACTTAACGGTGACTATTCTGAGGACGAGCTTAAAAGGGTTGTATTGGTTGCTTTAGTATGTGCTCAGAATCAACCGGAGAAGAGACCAACGATGCTCGAGGTGGTGGAACTTCTGAAAGGTGAGTCGAAAGAGAAGGTATCGCAGTTGGAGAATAATGAACTGTTTAAGAACCCTCTTGCTGTTGGAAATAATGATAATGAGATATTCGTATCAGCTGCTGAAGGGAGTTCAGACTTCATCTCAGAAGAGAAGGATTCCAAACATGAGATGGAAGAGAATAAAGAACCATGA 1107 0.4417 MAFFKVFCCGIASDRGRGKKQPPWRVFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKADMEFAVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNLSLLSHLHGQHSTESLLDWNRRMNIAIGSAEGILYLHVQATPHIIHRDVKASNVLLDSDFQARVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKANESCDVYSFGILLLELASGKKPLEKLSSSVKRSINDWALPLACEKKFSELADPRLNGDYSEDELKRVVLVALVCAQNQPEKRPTMLEVVELLKGESKEKVSQLENNELFKNPLAVGNNDNEIFVSAAEGSSDFISEEKDSKHEMEENKEP 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07715 368 ProSiteProfiles Protein kinase domain profile. 39 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g07715 368 Pfam Protein kinase domain 40 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g07715 368 Coils Coil 304 324 - -
Vivi2g07715 368 PANTHER OS01G0253100 PROTEIN 20 317 - -
Vivi2g07715 368 MobiDBLite consensus disorder prediction 346 368 - -
Vivi2g07715 368 Gene3D Transferase(Phosphotransferase) domain 1 115 328 - -
Vivi2g07715 368 Gene3D Phosphorylase Kinase; domain 1 14 114 - -
Vivi2g07715 368 SUPERFAMILY Protein kinase-like (PK-like) 21 310 IPR011009 -
Vivi2g07715 368 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Vivi2g07715 368 CDD STKc_IRAK 45 312 - -
Vivi2g07715 368 FunFam PTI1-like tyrosine-protein kinase At3g15890 115 326 - -
Vivi2g07715 368 MobiDBLite consensus disorder prediction 350 368 - -
Vivi2g07715 368 ProSitePatterns Protein kinases ATP-binding region signature. 45 67 IPR017441 GO:0005524
Vivi2g07715 368 FunFam PTI1-like tyrosine-protein kinase At3g15890 12 114 - -
Vivi2g07715 368 SMART serkin_6 39 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07715 Vivi-Chr2 224849261 224851816 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g07715 27 313 Trihelix Transcription Factor Family AT1G70460 50.515 4.84e-93 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Vivi2g07715 Pkinase 4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07715 - - gmx:100788153 660.603