Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07708 ATGATGGGCTTAATCAAAAATGGAACTTTGTTTTTGTATATTATGATGCTAATTCTGTTAAGAACCTGTCAAGCCAAAGATCAACATATTCATCAGATACAGCCTGGATTTAGTGCTTCTCGTTCGGATTGGAACGATCATAACGGTTTCTTTTTACTATCGAACAACTCGGCTTTTGCTTTTGGATTCTTCACAACCCTTGATGTTTCTCTTTTTGTTTTAGTAGTGATTCATTTGAGTAGCTTCAAAGTTGTTTGGACAGCAAATAGAGGCTTGCTTGTTAGAAATTCTGATAAATTCGTGTTTGAGCATAGCGGAAATGCTTATTTGGAAAGTGGAAATGGTTTTGTTTGGGCAACAAACACAACAGGACAGAAAGTTAAGGACATGGAGTTGTTGGATTCAGGAAATTTGGTTTTGTTTGGCGAAAATCGGAAAGTTGTTTGGCAAAGTTTTAGTCATCCTACTGATACACTTTTGCCTGGCCAATCCTTTGTTGAAGGAATGAGTCTCAAGAGTTTTCGGAATCGAATGAACTTGTTTCATTTTCTTAGTTATGTAGAAGGTGATTTGGTTCTGTATGCACGATTCGAAACTTCACAATTGTATTGGTCCTTAATGGGAGAAATTAGTAAAACTCAAAGTTCGAAAAACGTTACGAGTAGTAAAAAGGTTCACTATGCTTCTTTGGTTTCTAATTCATGGAACTTTTATGGTAAGAATGGAGTTTTAGTTTGGAAAATTGTGTTTTCTGATCATTCAGATTCGAAGTCATTCTACGCTGCGATTTTGGATCCAAATGGTGCAATTTCTTTCTATGATCTTAACAAAGGGAAGTCTACTAATCCTGAGACATTGAGAGTGCCACAAGACCCTTGTGGAATTCCTGAGCCTTGTGATCCTTACTATGTTTGTTTCTTTGAGAATTGGTGTGAATGTCCTACGCTTCTTCGGTCGCGTTTCAATTGCAAACCTCCTAACGTCTCAGCGTGTTCTCGTGGAAGCTCGACAGAACTTTTATATGTTGGCGAAGATCTTGATTACTTTGCGCTTAAATATGATGCACCTGTTTTGAAAAAATCGACTTTGGATTCGTGCAAAGAGGCTTGTGTAAGAAACTGTTCCTGCCTTGTGCTTTTCTATGAGAATAGTACAGGTAGTTGCTTTCATTTCGCGCAAACCGGGAGCTTCCAACGGTTTAAAGGAAGCAGCGGCGGTTATGTTTCGTATATGAAGGTTTCGACTGATAGTGGTGGAAACGACGGCGATGATCATGGAAGAAAGACCATGCTGCTGGTTTTTGTTATAGGGATTCTCACAGTTTTCGCTATTTTCGGTCTTATAGCTGGATTCTGGTGCTACTATTTCAAGAAGAAGAATTTTGATGAGTATCCTCGAGATGATACTTTGGAGGAAGATGAATTCTTTGATAGTCTCTCTAATATGCCGGCGCGTTTTACCTATCGTACACTTGCTAGAGCAACTAAGGACTTCTCCACGAAAATCGGGGAAGGAGGATTCGGCTCGGTGTATCTAGGTGTACTTGAAGATGGTAAAACACAGTTGGCAGTGAAAAAATTGGAAGGAGTAGGACAAGGAGCGAAAGAGTTCAAAGCAGAAGTATCGATAATCGGAAGTATTCACCATGTTCATCTTGTGAAGCTTAAAGGGTTCTGCGCCGAAGGTCCTCATCGAATGCTTGTTTATGAATACATGGCAAGAGGCTCATTGGATAAATGGATTTTCAAAAACAGCGAAAACACTATGTTGTTAACTTGGCAAACAAGGTACAATATCGCAATAGGCACTGCGAAAGGATTGGCCTATCTTCATGAAGAGTGTGAAGTTAGGATCATTCATTGTGATATCAAACCACAAAATGTTCTTCTCGACGATAATTTCATGGCTAAGGTTTCTGATTTCGGGTTGGCGAAACTAATGAGCAGAGAACAAAGCCATGTTTTCACTACTCTAAGAGGAACAAGAGGGTACTTAGCACCCGAATGGATAACTAACTATGCGATTTCAGAGAAGAGCGACGTGTTTAGCTACGGAATGCTTTTGCTTGAGATTGTTGGTGGAAGGAAAAACTATGATCAATGGGAAGGAGAAGAGAAAGCTCATTTTCCTTCCTATGTATCAAAAATGATGGAGGAAGGGAAAATAAGAGAAGTTATCGACAAAAAGATAGATATCGATGAGGAAGACGAAAGTGTTGTGATAGCTCTTAAAGTTGCTCTTTGGTGTATACAAGATGACATGAATTTGAGACCTCCAATGAGTAAAGTTGCTCAAATGCTTGAAGGTTTGTGCATTGTAAATGATCCACCATCTTTGTTACACTCAAGTAGTTATACAAGTTTCTTGAAAATGAGTAGTGGAGAGGGTAGTTCATCAGGACAAGCTAGTTTTTATAGTAATGTTCCTTTGTCTTGTGTTCAGTTATCAGGACCAAGATGA 2460 0.3907 MMGLIKNGTLFLYIMMLILLRTCQAKDQHIHQIQPGFSASRSDWNDHNGFFLLSNNSAFAFGFFTTLDVSLFVLVVIHLSSFKVVWTANRGLLVRNSDKFVFEHSGNAYLESGNGFVWATNTTGQKVKDMELLDSGNLVLFGENRKVVWQSFSHPTDTLLPGQSFVEGMSLKSFRNRMNLFHFLSYVEGDLVLYARFETSQLYWSLMGEISKTQSSKNVTSSKKVHYASLVSNSWNFYGKNGVLVWKIVFSDHSDSKSFYAAILDPNGAISFYDLNKGKSTNPETLRVPQDPCGIPEPCDPYYVCFFENWCECPTLLRSRFNCKPPNVSACSRGSSTELLYVGEDLDYFALKYDAPVLKKSTLDSCKEACVRNCSCLVLFYENSTGSCFHFAQTGSFQRFKGSSGGYVSYMKVSTDSGGNDGDDHGRKTMLLVFVIGILTVFAIFGLIAGFWCYYFKKKNFDEYPRDDTLEEDEFFDSLSNMPARFTYRTLARATKDFSTKIGEGGFGSVYLGVLEDGKTQLAVKKLEGVGQGAKEFKAEVSIIGSIHHVHLVKLKGFCAEGPHRMLVYEYMARGSLDKWIFKNSENTMLLTWQTRYNIAIGTAKGLAYLHEECEVRIIHCDIKPQNVLLDDNFMAKVSDFGLAKLMSREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVFSYGMLLLEIVGGRKNYDQWEGEEKAHFPSYVSKMMEEGKIREVIDKKIDIDEEDESVVIALKVALWCIQDDMNLRPPMSKVAQMLEGLCIVNDPPSLLHSSSYTSFLKMSSGEGSSSGQASFYSNVPLSCVQLSGPR 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07708 819 CDD STKc_IRAK 502 770 - -
Vivi2g07708 819 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 40 778 - -
Vivi2g07708 819 SUPERFAMILY alpha-D-mannose-specific plant lectins 81 205 IPR036426 -
Vivi2g07708 819 Pfam Protein kinase domain 499 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g07708 819 ProSiteProfiles PAN/Apple domain profile. 331 414 IPR003609 -
Vivi2g07708 819 Gene3D Transferase(Phosphotransferase) domain 1 572 773 - -
Vivi2g07708 819 FunFam serine/threonine-protein kinase PBS1-like 465 571 - -
Vivi2g07708 819 CDD B_lectin 48 155 IPR001480 -
Vivi2g07708 819 ProSiteProfiles Protein kinase domain profile. 496 749 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g07708 819 Gene3D Phosphorylase Kinase; domain 1 463 571 - -
Vivi2g07708 819 CDD PAN_AP_plant 331 414 - -
Vivi2g07708 819 FunFam S-receptor-like kinase 5 572 776 - -
Vivi2g07708 819 ProSiteProfiles Bulb-type lectin domain profile. 37 153 IPR001480 -
Vivi2g07708 819 PIRSF SRK 4 815 IPR024171 GO:0004674
Vivi2g07708 819 ProSitePatterns Protein kinases ATP-binding region signature. 502 526 IPR017441 GO:0005524
Vivi2g07708 819 SUPERFAMILY Protein kinase-like (PK-like) 478 768 IPR011009 -
Vivi2g07708 819 Pfam D-mannose binding lectin 84 165 IPR001480 -
Vivi2g07708 819 SMART serkin_6 496 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g07708 819 Gene3D - 46 154 IPR036426 -
Vivi2g07708 819 SMART blect_4 43 155 IPR001480 -
Vivi2g07708 819 ProSitePatterns Serine/Threonine protein kinases active-site signature. 618 630 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07708 Vivi-Chr2 224655121 224658378 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g07708 472 777 Receptor kinase-like Gene Family AT5G20050 45.820 1.10e-87 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Vivi2g07708 Pkinase 2.8e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07708 - - psat:127087581 1593.17