Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07699 ATGGTACAATCAAAGAAATTCAGAGGTGTCAGGCAACGCCATTGGGGCTCTTGGGTCTCTGAGATTCGTCATCCATTATTGAAAAGGAGGGTGTGGTTAGGAACATTTGAAACAGCTGAAGAAGCTGCTAAAGCATATGATGAAGCAGCAGTTTTGATGAGTGGAAGAACTGCAAAAACCAACTTTCCAATTAACATGGAAAATAAAATTTCATCTTCGAGTTCAAGTTCGAGTTCGAGTTCTTCGAAAGCGTTTTCTGCAGTTCTGAGTGCAAAGTTAAGGAAGTGTTGCAAGTTTCCTTCACCTTCACTCACATGCTTGAGACTTGATGCAGAGAATTCGAACTTCGGTGTGTGGCAGAAAGGCGCGGGTCCTCGTTCCGAATCAAATTGGATTATGATGGTTGAGTTAGAAAGGAAGAAAAGTGATTCTGTGGCTGAGAAAGTAAAGCCAGAAGAGGAATTATGTAAGAATGGTTTGGATGATGAACAGAAAGTTGCTTTGCAGATGATAGAAGAACTTCTCAACAGAAACTAA 537 0.4097 MVQSKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAAKAYDEAAVLMSGRTAKTNFPINMENKISSSSSSSSSSSSKAFSAVLSAKLRKCCKFPSPSLTCLRLDAENSNFGVWQKGAGPRSESNWIMMVELERKKSDSVAEKVKPEEELCKNGLDDEQKVALQMIEELLNRN 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07699 178 CDD AP2 5 65 IPR001471 GO:0003700|GO:0006355
Vivi2g07699 178 Gene3D AP2/ERF domain 5 66 IPR036955 GO:0003700|GO:0006355
Vivi2g07699 178 SUPERFAMILY DNA-binding domain 6 65 IPR016177 GO:0003677
Vivi2g07699 178 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 3 137 - -
Vivi2g07699 178 SMART rav1_2 6 69 IPR001471 GO:0003700|GO:0006355
Vivi2g07699 178 Pfam AP2 domain 6 50 IPR001471 GO:0003700|GO:0006355
Vivi2g07699 178 FunFam Ethylene-responsive transcription factor 2 5 65 - -
Vivi2g07699 178 PRINTS Ethylene responsive element binding protein signature 7 18 IPR001471 GO:0003700|GO:0006355
Vivi2g07699 178 PRINTS Ethylene responsive element binding protein signature 29 45 IPR001471 GO:0003700|GO:0006355
Vivi2g07699 178 ProSiteProfiles AP2/ERF domain profile. 6 63 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07699 Vivi-Chr2 224519650 224520656 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g07699 1 178 AP2-EREBP Transcription Factor Family AT1G15360 61.307 8.01e-74 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Vivi2g07699 AP2 3.5e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07699 - - gmx:100796962 249.595