Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07659 ATGCCTTCCGCCGAACCTTCATCGCTCTCCGGCCAAACCATATGCGTCACCGGCGCCGGCGGATTCATCGCTTCATGGATGGTAAAACTCCTCCTCGAAAAAGGCTACACCGTCCGAGGAACCCTGCGAAACCCAGATGATGCAAAGAATGGACATTTGAAGGAGTTGGAAGGAGCAAAGGAAAGACTAACTCTGCATAAAGTTGATCTATTGGATCTTAACTCCGTTAAAGCTACCGTTAACGGTTGTCACGGTGTTTTTCATACTGCTTCTCCCGTTACCGATAACCCCGAAGAGATGGTGGAGCCTGCAGTGAATGGAGCAAAGAATGTTATCATAGCGGCTGCAGAAGCAAATGTGAGGCGCGTGGTTTTCACTTCCTCAATTGGCGCAGTCTATATGGACCCGAACAGGAGCGTTGATGTTGAAGTTGATGAGTCTTGTTGGAGTGATTTGGAGTTTTGCAAGAACACCAAGAATTGGTATTGTTATGGGAAAGCAGTGGCAGAACAAGCAGCATGGGATATAGCAAAAGAGAAAAAGGTAGATTTGGTTGTGGTGAATCCAGTTTTGGTTCTTGGACCATTGCTACAACCCACAATCAATGCAAGCACAATTCACATACTAAAGTACTTAACTGGCTCTGCAAAAACCTATGCAAATGCAACACAAGCTTATGTTCATGTTAGGGATGTTGCATTAGCACACATACTTGTTTATGAAAAACCTTCTGCTTCTGGTAGATACTTATGTGCTGAAAGTTCATTGCACCGTGGAGAACTTGTTGAAATTCTGGCTAAGTATTTCCCTGAATACCCAATTCCTACCAAGTGTTCAGATGAAAAGAACCCTCGAGTGAAGCCACATATCTTCTCAAACAAAAAACTGAAAGATTTAGGATTGGAATTTACTCCAGTGAGTCAATGTTTATATGAAACCGTTAAGAGTCTGCAAGAGCATGGTCACATTCCTGTTCCAAAAGAAGATGATTCTGTAGAAGTCAAATCCTAA 1011 0.4322 MPSAEPSSLSGQTICVTGAGGFIASWMVKLLLEKGYTVRGTLRNPDDAKNGHLKELEGAKERLTLHKVDLLDLNSVKATVNGCHGVFHTASPVTDNPEEMVEPAVNGAKNVIIAAAEANVRRVVFTSSIGAVYMDPNRSVDVEVDESCWSDLEFCKNTKNWYCYGKAVAEQAAWDIAKEKKVDLVVVNPVLVLGPLLQPTINASTIHILKYLTGSAKTYANATQAYVHVRDVALAHILVYEKPSASGRYLCAESSLHRGELVEILAKYFPEYPIPTKCSDEKNPRVKPHIFSNKKLKDLGLEFTPVSQCLYETVKSLQEHGHIPVPKEDDSVEVKS 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07659 336 Pfam NAD dependent epimerase/dehydratase family 14 245 IPR001509 -
Vivi2g07659 336 CDD FR_SDR_e 15 301 - -
Vivi2g07659 336 Gene3D - 4 336 - -
Vivi2g07659 336 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 318 IPR036291 -
Vivi2g07659 336 FunFam Cinnamoyl-CoA reductase 1 5 336 - -
Vivi2g07659 336 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 13 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07659 Vivi-Chr2 223571289 223574776 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g07659 9 277 Monolignol Biosynthesis Gene Families AT1G80820 75.093 5.15e-145 408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07659 K09753 - gmx:100789070 596.275