Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07635 ATGGTGTTCAACACAAAATATTCTGGGAAGAACGTGATGGTGATGTTTGGTTTCAAAAAAAATTGGATAGATTTTGCAAAGTGTTTAAAATATGGAGATATCTTAACTTTTAAACATACTGGTGGAGCATACTTCAAAGTAAAGATATTTGGTAGAAATTCTTTAGAAATAAATTATTCAAATATCAAATGTTTAGATGAAGTTGTTGATTTAAGTGATGATGAGAGTGAAGAACACACACAAACTCAAAAGAGAAAAATTGGCAAAAGAAAAGTTGCAGATTTGAATTCAAGTAGAAACAAAGGTGTGATTAAGAAGGCCAAAAAATGTTCAAACATAGCAAATATTAATGATGGGAGAGTTAATAAGGAGAGTCCATATTTTGAAGTTACATTGACACCAACTTATGTCAATTATTATAGTATGAGGATACCAAATGTGTTTTCAAGAAAATATTTGAAAGAGATGGAAGAAATTGCAATCTTGAAAGTTGGGGAGGACATGACTATGAAAGTGGGGATCAGGTTTGATACTAACGCCAAAGGAATGGTTTTTCAAAATGGTTGGAAGAATTTTTCACAAAAATATAATTTACAAATCGGTGATATTTGTAAATTTGTGATGACACAATCCAAACCACTTTTATTTTCTATTGCTATTACTAGAGCCAAAATTGAATCAAAACCTAAGAAGTTCCAAGGTGTCTCATCTGGTGGTGGAACAATTCCAAAAAGAAAAAGCATTGGAGAAAGTTCTAGAGGTCGAGGTCGCCCAAAAAACATGTTTCCAAAGGTATTCTTCTAA 804 0.3172 MVFNTKYSGKNVMVMFGFKKNWIDFAKCLKYGDILTFKHTGGAYFKVKIFGRNSLEINYSNIKCLDEVVDLSDDESEEHTQTQKRKIGKRKVADLNSSRNKGVIKKAKKCSNIANINDGRVNKESPYFEVTLTPTYVNYYSMRIPNVFSRKYLKEMEEIAILKVGEDMTMKVGIRFDTNAKGMVFQNGWKNFSQKYNLQIGDICKFVMTQSKPLLFSIAITRAKIESKPKKFQGVSSGGGTIPKRKSIGESSRGRGRPKNMFPKVFF 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07635 267 Pfam B3 DNA binding domain 128 212 IPR003340 GO:0003677
Vivi2g07635 267 MobiDBLite consensus disorder prediction 231 259 - -
Vivi2g07635 267 SUPERFAMILY DNA-binding pseudobarrel domain 14 60 IPR015300 -
Vivi2g07635 267 CDD B3_DNA 126 212 IPR003340 GO:0003677
Vivi2g07635 267 Gene3D - 102 225 IPR015300 -
Vivi2g07635 267 ProSiteProfiles B3 DNA-binding domain profile. 127 224 IPR003340 GO:0003677
Vivi2g07635 267 SMART B3_2 128 224 IPR003340 GO:0003677
Vivi2g07635 267 SUPERFAMILY DNA-binding pseudobarrel domain 122 218 IPR015300 -
Vivi2g07635 267 PANTHER B3 DOMAIN-CONTAINING 124 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07635 Vivi-Chr2 222921535 222933204 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g07635 10 219 REM Transcription Factor Family AT5G09780 24.793 5.79e-11 60.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Vivi2g07635 B3 1.3e-11 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07635 - - vvo:131654032 463.766