Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07616 ATGGATTATGCACCATGGATTAACACTTCATTAGATCTCAACATTAACCCTCAGAGACCTCATCAAGAAGCTCATAAAAATGGAATGGAAAACAATTTTTTCTCATTAGGGTTGAGGATCTCTTCTCCAAAAGAAGAGTCAAGTGATGTTTTGGTGGAGGAGCTGAAACGAGTGAGTGCAGAAAACAAGAAGCTAACAGGAATGTTGACAGAGATGTGTGAGAATTACAACACACTGAGAAACAACATGATGGAATATATGAAGAAGAATCCAGAAACTAAAGAGGTTATAACTTCGTCAAAGAAAAGAAAATCTGATGAAATAAGCACTAGCAACAACAATCTCATAGGAGTTAACGGAAACAACTCTGAGAGTAGTTCGAGTGATGAAGATCAATCATGCAAGAAACCACGAGAATTAGAAACTTGCATTAAGGCTAAAGTTTCAAGAGTTTATTTCAAGACCGAACCATCTGATTCAAGCCTTATTGTGAAAGATGGATATCAATGGAGAAAATATGGACAAAAGGTGACAAGAGATAACCCTTCACCAAGAGCTTATTTCAAATGTTCATTCGCTCCGAGCTGCATAGTGAAGAAGAAAGTGCAAAGGAGTGTGGATGATCCATCGGTTACAGTTGCAACATACGAAGGAGAACACAATCATCCTTATCCATCTCAGATGGAGCCGACAAATAATCGTTGTAGGAATCAGACGAACTCGGCAGTAACAGCTTCTTCGGGTCCTGCTGCACCAAGTACAACAGTTACACTTGATTGGACAAAGAAACCTAAGTGTAGCAATGATTCTTCTCCTAAGAATGTGATGATAAATGGTAATTCCAAAATGGAAATACCTCAGATTTTGGTGGAACAAATGGCGAATTCGTTGACCAAAGATGTTAAGTTTAGAGCAGCACTTGCAGCTGCTATATCAGGACAAATGTTGCACCAGAATTAA 960 0.3865 MDYAPWINTSLDLNINPQRPHQEAHKNGMENNFFSLGLRISSPKEESSDVLVEELKRVSAENKKLTGMLTEMCENYNTLRNNMMEYMKKNPETKEVITSSKKRKSDEISTSNNNLIGVNGNNSESSSSDEDQSCKKPRELETCIKAKVSRVYFKTEPSDSSLIVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCIVKKKVQRSVDDPSVTVATYEGEHNHPYPSQMEPTNNRCRNQTNSAVTASSGPAAPSTTVTLDWTKKPKCSNDSSPKNVMINGNSKMEIPQILVEQMANSLTKDVKFRAALAAAISGQMLHQN 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07616 319 Coils Coil 69 89 - -
Vivi2g07616 319 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 44 315 IPR044810 GO:0003700
Vivi2g07616 319 MobiDBLite consensus disorder prediction 109 128 - -
Vivi2g07616 319 ProSiteProfiles WRKY domain profile. 159 225 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi2g07616 319 MobiDBLite consensus disorder prediction 240 278 - -
Vivi2g07616 319 Gene3D WRKY domain 132 226 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi2g07616 319 SMART WRKY_cls 164 224 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi2g07616 319 Pfam WRKY DNA -binding domain 165 223 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi2g07616 319 FunFam WRKY transcription factor 40 149 226 - -
Vivi2g07616 319 MobiDBLite consensus disorder prediction 92 136 - -
Vivi2g07616 319 SUPERFAMILY WRKY DNA-binding domain 162 225 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi2g07616 319 MobiDBLite consensus disorder prediction 92 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07616 Vivi-Chr2 221902866 221904619 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g07616 6 319 WRKY Transcription Factor Family AT1G80840 50.602 3.40e-92 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vivi2g07616 WRKY 6.4e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07616 - - gsj:114388658 374.015