Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07613 ATGGATCGAATTAATATGAACAAGAAAAGAACGATTCTGTTCAACAAATACGAGATAGGTAAAACCCTAGGTCAAGGAAATTTCGCGAAAGTGTACCATGGAAGAAACGTTAGCACGAACGAGAACGTGGCTATAAAAGTGATTAAGAAGGAGAAGCTGAAGAAAGAGAGACTCATGAAACAAATCAAACGCGAAGTTTCTGTTATGAGTCTCGTTCGTCATCCTCACATCGTTGAATTGAAAGAGGTTATGGCGAACAAAGCCAAAGTGTTCATGGTAGTTGAATACGTCAAAGGCGGCGAGCTTTTCGCGAAGGTTGCGAAAGGGAAGATGAAAGAAGAGATTGCCAGGAAGTATTTTCAGCAATTGATTAGTGCTGTTGATTTCTGTCATAGTCGCGGTGTTACGCATCGTGATTTGAAGCCGGAGAATCTGCTGTTGGATGAGAATGAAGATCTGAAGGTTTCTGATTTTGGATTGTCGGCGTTGCCGGATCAACGACGATCCGACGGGATGCTTGTTACGCCGTGCGGGACTCCGGCGTACGTTGCGCCGGAGGTTTTGAAGAAGATTGGATATGATGGATCGAAGGCGGATATTTGGTCCTGTGGTGTGATTCTGTATGCTTTGCTTTGTGGATATCTGCCTTTTCAAGGGGAGAATGTGATGAGGATTTATAGTAAATCTTTTAAAGCGGATTATGCTTTGCCGGAGTGGATTTCGCCGGGGGCGAAGAAATTGATTAAGAATTTGCTGGTTGTTGATCCGGAAAAGAGGTATTCGATTGTTGATATTATGAAAGATCCTTGGTTTCAGTTAGGGTTTATGAGACCGATTGCTTTTTCGATGAAGCAATCTGCTGTGGATGATAATATTGATTTTAGTGGCGATGATGAAGGGAATGGTGATGCGAATAATGCTGAGGCTGTGGGTGGAATTGGTGGTGGTGGTAAGAAACATGCGAGGAGGCCGTCTTATAACGCGTTTGAGATAATTTCGTCGTTGTCGCATGGATTTGATTTGAGGAACTTGTTTGAGACTAGGAAGAGATCGCCGTCGATGTTTATATCGAAATTGTCTGCTTCGGCGGTGGTTGGGAAGCTGGAGAGTTTCGCGAAGAAGGTGAATTTGAAGGTGATAGGGAAGAAGGATTTTATTGTGAGAATGCAGGGGGTGACGGAGGGGAGGAAAGGGAAATTGGGTATGACTGTTGAGGTGTTTGAGGTTGCGCCGGATGTGGCGGTGGTGGAGTTTTCTAAATCAGCTGGAGATACTTTGGAGTATGTGAAGTTTTGTGAAGATGAAGTTAGACCTTCTCTCAAAGACATTGTGTGGAGTTGGCAGGGTGATTCTCATTCATCCTGCTAA 1368 0.4408 MDRINMNKKRTILFNKYEIGKTLGQGNFAKVYHGRNVSTNENVAIKVIKKEKLKKERLMKQIKREVSVMSLVRHPHIVELKEVMANKAKVFMVVEYVKGGELFAKVAKGKMKEEIARKYFQQLISAVDFCHSRGVTHRDLKPENLLLDENEDLKVSDFGLSALPDQRRSDGMLVTPCGTPAYVAPEVLKKIGYDGSKADIWSCGVILYALLCGYLPFQGENVMRIYSKSFKADYALPEWISPGAKKLIKNLLVVDPEKRYSIVDIMKDPWFQLGFMRPIAFSMKQSAVDDNIDFSGDDEGNGDANNAEAVGGIGGGGKKHARRPSYNAFEIISSLSHGFDLRNLFETRKRSPSMFISKLSASAVVGKLESFAKKVNLKVIGKKDFIVRMQGVTEGRKGKLGMTVEVFEVAPDVAVVEFSKSAGDTLEYVKFCEDEVRPSLKDIVWSWQGDSHSSC 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07613 455 ProSiteProfiles Protein kinase domain profile. 17 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g07613 455 Coils Coil 45 65 - -
Vivi2g07613 455 ProSitePatterns Protein kinases ATP-binding region signature. 23 50 IPR017441 GO:0005524
Vivi2g07613 455 FunFam Aurora kinase A 9 100 - -
Vivi2g07613 455 CDD CIPK_C 327 441 - -
Vivi2g07613 455 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 7 441 - -
Vivi2g07613 455 FunFam Non-specific serine/threonine protein kinase 322 445 - -
Vivi2g07613 455 Gene3D Transferase(Phosphotransferase) domain 1 7 308 - -
Vivi2g07613 455 FunFam Non-specific serine/threonine protein kinase 10 310 - -
Vivi2g07613 455 Pfam Protein kinase domain 17 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g07613 455 ProSitePatterns Serine/Threonine protein kinases active-site signature. 135 147 IPR008271 GO:0004672|GO:0006468
Vivi2g07613 455 ProSiteProfiles NAF domain profile. 321 346 IPR018451 GO:0007165
Vivi2g07613 455 Pfam NAF domain 325 379 IPR004041 GO:0007165
Vivi2g07613 455 SUPERFAMILY Protein kinase-like (PK-like) 13 272 IPR011009 -
Vivi2g07613 455 SMART serkin_6 17 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g07613 455 Gene3D Kinase associated domain 1, KA1 322 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07613 Vivi-Chr2 221817875 221819752 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g07613 6 454 CBL-interacting serine-threonine protein kinases AT5G10930 58.315 0.0 543
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Vivi2g07613 Pkinase 1.9e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07613 - - gmx:100797846 726.857