Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07611 ATGGCTGTCCCAGGTTCTTCTTGTTCTGGGCAGCCACAGTTCATTTCCAGCACCGGAAACCAAAGCCTTTCCAATGCTCCCCTTATTGACACAACAGATACTGATCAAATTATTGTTCCTGATAGAACAAGCTGGAAAAATTTATTTGCATACATGGGACCTGGGTTTCTTGTTTCCATTGCTTATATAGACCCAGGAAATTTTGAGACGGATCTACAATCTGGGGCACAATTTAAGTATGAGTTACTTTGGATCATATTGGTGGCATCATGTGCTGCTCTTGTAATTCAATCGATGGCTGCGAATCTTGGGGTGGTCACTGGAAAGCACTTAGCAGAGCATTGTAGAGCTGAATATTCCCGTGTGTCTAACTTTATTCTTTGGGTTATAGCTGAAATTGCCATAGTGGCCTGTGACATCCCCGAAGTGATTGGGACAGCCTTTGCATTAAATATGCTCTTCAATATACCTGTTTGGATTGGTGTCCTACTGACCGGACTCAGCACATTGATGCTCTTAGCATTACAGCAATATGGGGTTAGGAAACTTGAATTCTTGATTGCATTTCTTGTGTTTACAATTGCTGCCTGTTTTTGGGCTGAGCTTGGATATGCAAAGCCTGATGCTAAAGAAGTTGTGAAGGGTCTTTTTGTGCCACAACTAAAAGGGAACGGAGCTACTGGTCTTGCAATTTCACTTCTCGGTGCTATGGTTATGCCCCACAATCTCTTCCTGCACTCGGCATTGGTACTTTCTAGGAAAATACCTCGATCAGTTCGTGGAATCAAAGAGGCTTGCAGATTTTACATGATAGAAAGTGCCTTTGCTCTTATGGTGGCCTTCCTCATAAATGTTTCTGTCATTTCTGTAAGTGGTGCCGTTTGCAATTCTTCAAATTTGAATGAAGAAGATCAGATGAACTGTCGGGATTTGGATCTAAACAAAGCTTCCTTCCTACTTAGAAATGTCTTAGGGAAATGGAGTTCAAAACTGTTCGGAGTTGCTTTGCTTGCTTCAGGTCAAAGTTCTACAATAACAGGAACTTATGCAGGGCAGTATGTCATGCAGGGATTTCTTGATTTACGATTAACACCATGGATCCGGAATATGTTAACCCGTTGCTTAGCCATAGTTCCTAGTTTGATTGTTGCAGTCATTGGCGGCTCTGCTGGGGCTGGGAAGCTCATCATAATTGCATCTATGATTTTATCATTTGAGCTTCCCTTTGCTTTGGTTCCACTCCTCAAGTTCACAAGTAGCAAAACCAAGATGGGGGCACATGTTAACTCTACCATGATTTCGGCCATTACTTGGATAATCGGTTCCCTTATTATGATTATTAATATATACTACTTAATAACTGGTTTCATCAAGCTGCTTCTTCATAGTGAGATAGAAATCGTGGCCAAGGTGTTTCTTGGGATGTTAGGATTTTCAGGCATGGCAGTATATTTGGCTGGTATAGCTTATCTCGTACTTCGCAAAAATAAAGAGGGTACACACCTTTTGGCTCTAACAGCACCTGAAAATCAGCAAATGACAAATGAACAAGTAAATGGATCAAGTCTTCCAAGAGAAGACATAGTAAACATGCAATTGCCTCAGAGAAGTAGTCCTGAAGACCTTGACTAA 1632 0.4148 MAVPGSSCSGQPQFISSTGNQSLSNAPLIDTTDTDQIIVPDRTSWKNLFAYMGPGFLVSIAYIDPGNFETDLQSGAQFKYELLWIILVASCAALVIQSMAANLGVVTGKHLAEHCRAEYSRVSNFILWVIAEIAIVACDIPEVIGTAFALNMLFNIPVWIGVLLTGLSTLMLLALQQYGVRKLEFLIAFLVFTIAACFWAELGYAKPDAKEVVKGLFVPQLKGNGATGLAISLLGAMVMPHNLFLHSALVLSRKIPRSVRGIKEACRFYMIESAFALMVAFLINVSVISVSGAVCNSSNLNEEDQMNCRDLDLNKASFLLRNVLGKWSSKLFGVALLASGQSSTITGTYAGQYVMQGFLDLRLTPWIRNMLTRCLAIVPSLIVAVIGGSAGAGKLIIIASMILSFELPFALVPLLKFTSSKTKMGAHVNSTMISAITWIIGSLIMIINIYYLITGFIKLLLHSEIEIVAKVFLGMLGFSGMAVYLAGIAYLVLRKNKEGTHLLALTAPENQQMTNEQVNGSSLPREDIVNMQLPQRSSPEDLD 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07611 543 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 40 501 IPR001046 GO:0016020|GO:0030001|GO:0046873
Vivi2g07611 543 NCBIfam Nramp family divalent metal transporter 53 421 - -
Vivi2g07611 543 Hamap Divalent metal cation transporter MntH [mntH]. 40 456 IPR001046 GO:0016020|GO:0030001|GO:0046873
Vivi2g07611 543 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 47 424 IPR001046 GO:0016020|GO:0030001|GO:0046873
Vivi2g07611 543 PRINTS Natural resistance-associated macrophage protein signature 400 419 IPR001046 GO:0016020|GO:0030001|GO:0046873
Vivi2g07611 543 PRINTS Natural resistance-associated macrophage protein signature 180 201 IPR001046 GO:0016020|GO:0030001|GO:0046873
Vivi2g07611 543 PRINTS Natural resistance-associated macrophage protein signature 368 385 IPR001046 GO:0016020|GO:0030001|GO:0046873
Vivi2g07611 543 PRINTS Natural resistance-associated macrophage protein signature 340 359 IPR001046 GO:0016020|GO:0030001|GO:0046873
Vivi2g07611 543 PRINTS Natural resistance-associated macrophage protein signature 230 253 IPR001046 GO:0016020|GO:0030001|GO:0046873
Vivi2g07611 543 PRINTS Natural resistance-associated macrophage protein signature 127 153 IPR001046 GO:0016020|GO:0030001|GO:0046873
Vivi2g07611 543 PRINTS Natural resistance-associated macrophage protein signature 155 174 IPR001046 GO:0016020|GO:0030001|GO:0046873
Vivi2g07611 543 Pfam Natural resistance-associated macrophage protein 68 430 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07611 Vivi-Chr2 221758615 221763153 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g07611 16 536 Inorganic Solute Cotransporters AT1G15960 80.306 0.0 868
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07611 K21398 - gmx:100797298 941.799