Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07583 ATGGCGTCCGAAAACCCGAAAGCAGAGAGCGCGCTAGAGGATTCAAAGGTAGAGGCAATAACCAAAGCCGTAGATTCTCTCCTGAAATGGCACAAATCACGATCAGAAACGGAAAAACCCAAATTGTTCGAAGAAGAAGACTTCATCTACCTCGTCTTAACCCTCAAGAAGATTCCCACAAACGGCCGCGTGAACCCTCACAAGATCCCCATACCTCACTCCCTCCTCTCTCCGTCATCGGAGCAATGTCTCATCATCGACGACCGTGCCAACAAGCCCGCACGTCTCACCAAAGATGAGGCTAAGAAGAAGATTCAGTCTGAGTCCATTCCTATTTCCAAGATTCTCAAGCTCTCCAAGCTCACCACGGATTATCGCCCGTTTGAGGCCAAGCGTAAGCTGTGTAATTCCTATGATTTGTTTTTTGCTGATAAGACTGTTGTGCCTTTGCTGCCGAGGTTGCTTGGGAAGCAGTTTTTTAAGAAGAGGAAGGTTCCGGTGCAGCTTGATTTGAAGAAGAAGAACTGGAAGGAGCAGATTGACAGAGCGTTATCTTCCGCGCTGCTGTTTTTGAGGACTGGGACTTGTAGTGTTTTGAAGGTGGCCAAGATGAGTATGGAGAGGGATCAGATTGTGGAGAATTTGGCTGCTGCTATGGAGGGGGTTGTTGAGGTTTTTCCCAAGAAATGGGGGGTTGTTAGGTCTTTTCATGTTAAGTTGTTGGATTCGGTTGCGTTGCCGGTTTATCAGGTGGTGCCGGATGTTAGGTTGAAGATTGAGGGGGTTAAGGATTTGGAGGCTGCGCTGGTGAAGGATGAGAAGAAGGTTCGTGATGGGAAGGACGGGAAGAAGAGTAAGAAGGGGAGGATTCATGAGATTAAGTATATGGATGATAGAATGAGTGAGGAGGGTGATGTTCGTAGTGATGTTGATGTCGATGTTGCTGATATTGATATTGATGATGATGCTGTTGGTGGTGGTGATAAGTTAGATGGTGATCACGAGAACGGTGAGATTGAGAGTGGAGGGATTAGGATTAAGAAGAGGAAGAAAGGAGTTAAAGGGAAGAAAGAGGCTTTGAGTGAGGCAGGAAGTGTGAAATCGTTGAAGGGTTCTGCTAAGAGGAAGAAGAAAGATGTGTTAGAGACTGTGAATGCTGCAGAAGAAGAAGGTTCCATCAAGAAGGGCAAGGATAAATTATTCACTGAGGACGCTGGTTCGGACAAGAAGACAAAGAGAGCGGCTTTGAGTGAGGCGGGAAGTGTGAAATCTTTGAAGGGTTCTGCTAAGAGAAAGAAGAAAAATGTGTTGGAGACTGTGAATGTGAATGTAAATGCTGCAGATGAAAGTTCCGTCAAGAAGGGAAAGGATAAATTATTCACCGAGGACGCTGGTTCGGACAAGAAGACAAAGAGAGCTGATGTGAAGGTAAAGGGTAGGAAAAGTTAG 1449 0.4603 MASENPKAESALEDSKVEAITKAVDSLLKWHKSRSETEKPKLFEEEDFIYLVLTLKKIPTNGRVNPHKIPIPHSLLSPSSEQCLIIDDRANKPARLTKDEAKKKIQSESIPISKILKLSKLTTDYRPFEAKRKLCNSYDLFFADKTVVPLLPRLLGKQFFKKRKVPVQLDLKKKNWKEQIDRALSSALLFLRTGTCSVLKVAKMSMERDQIVENLAAAMEGVVEVFPKKWGVVRSFHVKLLDSVALPVYQVVPDVRLKIEGVKDLEAALVKDEKKVRDGKDGKKSKKGRIHEIKYMDDRMSEEGDVRSDVDVDVADIDIDDDAVGGGDKLDGDHENGEIESGGIRIKKRKKGVKGKKEALSEAGSVKSLKGSAKRKKKDVLETVNAAEEEGSIKKGKDKLFTEDAGSDKKTKRAALSEAGSVKSLKGSAKRKKKNVLETVNVNVNAADESSVKKGKDKLFTEDAGSDKKTKRADVKVKGRKS 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07583 482 Gene3D - 92 186 IPR016095 -
Vivi2g07583 482 FunFam Ribosomal protein L1p/L10e family 94 185 - -
Vivi2g07583 482 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 22 242 - -
Vivi2g07583 482 MobiDBLite consensus disorder prediction 375 416 - -
Vivi2g07583 482 MobiDBLite consensus disorder prediction 450 473 - -
Vivi2g07583 482 MobiDBLite consensus disorder prediction 323 482 - -
Vivi2g07583 482 Pfam Ribosomal protein L1p/L10e family 39 244 IPR028364 -
Vivi2g07583 482 SUPERFAMILY Ribosomal protein L1 21 249 IPR023674 -
Vivi2g07583 482 CDD Ribosomal_L1 20 248 IPR028364 -
Vivi2g07583 482 Coils Coil 370 390 - -
Vivi2g07583 482 MobiDBLite consensus disorder prediction 323 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07583 Vivi-Chr2 221284843 221286668 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g07583 137 239 Cytoplasmic Ribosomal Protein Gene Family AT2G27530 26.214 3.13e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07583 K14775 - qsa:O6P43_014803 399.438