Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07576 ATGGATCACTTCTTCTCTCTCATTTGCCCTAATTCTACATCTATATGGGATGGAAAAGGATTCTCCGAGTGTTTTGATGACATTGTGTTAGGTTTTGCAGTGAATGTAGTGACTATTGTTATTATTGTTGTGTTTGGATTTAGTCAAAAGATTGGTGGCTGTGGTCGTGGAGCTCAGAGATCAGACTCTCAGACGCCTCTTCCAGAGAAATTTGTCCTGGATTATGTACCACCCGTCGGAGCTTGCTTCTCAGTTTTGGAAATAATTTTCCTGCTTAAGAAAGAACATGATGGTAGCTATGTTGAATATTATAAGTGGTTATGTCATTGTTCTGAATTGTTGGTGTGGGCAAATATCATTCTCTTCACAAAGTATGCAAGGAGTCATTTCATAGTCTTCGACCGTGTCTTATGTTTCTGGTGGATTCTGAAACCAATATTGGGGATTTTCCATTTTATAACAAAGTTTCCATCATTGGAGGTGTCAGTATGCATAATGGAAAGCTTAGTAATTCTCTTGAATATATCATTTTGCATAGCTATCAATGTGATCAGGATAAAGAGATTATCTTCCAAAAGCAGTTTATTGGAAGATCCACTTCTTTCCAACGGAGGGGACCTTGAGGAAGGTGAAAATCATGACCTTGGAAATAATGGTAACTTTTGGGATTTGATGACTTTCAAATTCATAAGTCCAGTGATGAATCAAGGTGTGCTAAAGCAACTAGACTCTGGCGATCTTTTTCCACTACTATCTGATATGAGTCCTTCTTTCTGTCATGATATAATTAAATCCAGCTGGCGAGAACAATCGAGTAATTATGGTTCAAACCCTTCCTTGCTTAGAGCACTTTGTAATGCATATGGATGGCAATATCTCCGTCTTGGTTTATTGAAGGTGATAAATGACGGTATTGGTTTTGCGGGACCATTACTTCTCAATAAGCTGATCAAGTTTCTTCAACAAGGTTCCGCAACAAGTTCAGCAAGTTGGGATGGGTATTTATTTGCACTATCCTTGGGTCTCACATCAATAATTAAATCTTTTTTAGATACACAATATACTTTTCGTCTTGCCAAACTGAAGTTAAAGCTGCGATCCAGTATCATGACTCTAATCTATGAGAAGTGTCTATTTGTGAACCTAGCAGAGCGTTCAAAATTCACAAATGGAGAAATTCAGACATTTATGTCGGTGGATGCTGACAGAACTGTTAACTTGTGTAATAGTTTTCATGATATATGGAGCCTGCCTCTACAAATTGGAGTGGCACTTTACCTTCTGTATACTCAAGTCAAATTTGCATTTGTGTCTGGGTTAGCAATAACCATTTTGTTGATACCAGTGAATAAATGGATATCAACATTGATTGCACGTGCCACTGAGCAAATGATGAAAGAGAAGGATGAAAGGATTCGTAGGACCGGGGAACTTTTGACTTATATTCGCACATTGAAGATGTATGGATGGGAACTTCTTTTTTCTAGTTGGTTAATGGAGACAAGATCTTTGGAAGTGAAACACTTAGCTACTCGGAAGTACTTGGATGCATGGTGTGTATTCTTTTGGGCTACTACACCATCGCTCTTTTCTCTTTGCACATTTGGACTCTTTGCATTGATGGGACACCAGCTTGATGCCGCAACGGTTTTCACTTGTCTTGCTTTGTTTAACACGCTGATTTCACCACTTAATTCATTCCCTTGGGTTATTAATGGATTGATTGACGCCATCATATCCTCCCGACGGCTGAGTAGGTTTCTCTCTTGCCCTGAACATAGACGCAAAGTGGGAGAGAACATTTCATGTTCATCATCATTCTCGAGTGTACAACCTGATTCCTTACAAGATTTCGCTGTCTCTATCCAAGATGCATGCTGTTCTTGGTCCAGCAGTGACGAAAAAGCATTGAATATGGTGTTGAGTCATGTGACTCTTAGCCTGTCAAAGGGTTCCTTTGTTGCAGTTATTGGAGAGGTTGGTTCCGGAAAATCGTCCATGTTATATTCAATTCTTGGAGAAATGCGGCTTGATCAAGGCTCTATTTATTCCAATGGATCTATAGCTTATGTGCCACAGGTCCCTTGGATTTTATCTGGAACAGTACGTGACAATATATTATTTGGGAAAAGCTATCATCCTGAAAGGTATACGGATACAATAAAAGCGTGTGCGTTAGATGTTGATATCTCATTGATGGCTGGTGGTGACATGGCATATATTGGAGAGAAAGGAGTCAACTTATCAGGTGGACAGAGAGCTCGTCTTGCTTTGGCAAGAGTACTGTATCATGACTCGGATGTTATCATGCTCGATGATGTCCTGAGTGCAGTTGATGTACAAGTTGCTCAGTGGATCTTGCACAATGCCATCCTTGGTCCTCTCATGAAGGGAAAAACTAGATTGCTCTGTACCCACAACATTCAGGCAATATCTTCTGCAGATATGATCGTAGTATTGGACAAAGGGCATGTAAAGTGGATGGGAGGTTCAGCTGACTTTCCAACTTCTTCATATACAACATTCTCCCCATTGAATGAAATGGATTCAACTTCACATAATCAGCAGCAATCATGCAGCACAAATTCTTCTATAACCAAGGAGCAGTCTCTTCCTGATAGAATTCTTACGCAAGCTCTAGAGGAAGCAGAGGATGTAATTGAAGTTGAATTAAGGAAAGAGGGAAAAGTTGAACTTGGAGTGTATAAGAGTTATGCTGCTTTTACTGGCTGGTTCATTGCCGTGATTATATGTCTATCTGCTATTCTGATGCAAGCTTCGCGTAATGGAAATGATTTATGGCTTTCATATTGGGTTGATACCACAGCGGAAGATGGACAAACAAGTAACTCTATGTCTTTCTATCTGACTATTCTATGTCTCTTTTGCATTATGAATTCCTTTTTCACACTGGTGAGGGCATTCTCTTTTGCATTTGGTGGTTTACAAGCGGCAACTAAGGTACACAATAAACTGCTCAGCAAGCTTATCAATGCCCCTGTGCAATTCTTTGATCAGACCCCGGGTGGAAGAATACTGAATAGGTTATCATCAGATCTTTATACAATTGATGATTCTCTCCCATTTATTATGAACATTCTCCTGGCTAATTTCGTAGGCCTGCTGGGTATTGCAATTATTTTGTCTTACGTGCAGGTCTTCTTCTTAGTTTTGTTATTGCCATTTTGGTATATCTACAGTAGACTTCAGTTCTTCTACAGGTCAACATCAAGAGAATTAAGAAGACTGGATAGTGTTTCTCGCTCTCCAATATATACATCTTTCACTGAAACACTTGATGGATCATCAACTATCCGAGCCTTTAAATCTGAGGACTTTTTCTTTACCAAATTTAGTGACCACATGATATTATATCAGAAGACTTCTTATACTGAAACAGTGGCAAGTCTGTGGCTTTCCTTGCGTCTTCAGTTATTAGCTGCATTTATAATCTCATTCATAGCCCTGATGGCTGTTGTTGGATCTCAAGGAAGTCTGCCTATCAGTTTTGGTACCCCGGGATTGGTTGGATTGGCCCTCTCATACGCAGCTCCAATTGTGTCTCTACTGGGGAGTTTTCTAACAAGTTTTACTGAAACAGAGAAGGAGATGGTTTCAATTGAAAGAGCCCTTCAAGTTCTTTGTTTGGATGAATGCACTGCCAGTGTGGACATTCAAACTGCTTCGCTGCTGCAAAAAACCATATCCAGTGAATGCAAAGGAATGACGGTGGTCACAATTGCTCACCGGATTTCAACTGTCATAAATATGGACAACATTTTAATTCTTGATCATGGAAACCTGGCTGAACAAGGAAATCCACAAATTCTTCTGAAGGATGGCACCTCTATATTTTCTAGTTTTGTTAAAGCTTCATCTCTGTAA 3885 0.3967 MDHFFSLICPNSTSIWDGKGFSECFDDIVLGFAVNVVTIVIIVVFGFSQKIGGCGRGAQRSDSQTPLPEKFVLDYVPPVGACFSVLEIIFLLKKEHDGSYVEYYKWLCHCSELLVWANIILFTKYARSHFIVFDRVLCFWWILKPILGIFHFITKFPSLEVSVCIMESLVILLNISFCIAINVIRIKRLSSKSSLLEDPLLSNGGDLEEGENHDLGNNGNFWDLMTFKFISPVMNQGVLKQLDSGDLFPLLSDMSPSFCHDIIKSSWREQSSNYGSNPSLLRALCNAYGWQYLRLGLLKVINDGIGFAGPLLLNKLIKFLQQGSATSSASWDGYLFALSLGLTSIIKSFLDTQYTFRLAKLKLKLRSSIMTLIYEKCLFVNLAERSKFTNGEIQTFMSVDADRTVNLCNSFHDIWSLPLQIGVALYLLYTQVKFAFVSGLAITILLIPVNKWISTLIARATEQMMKEKDERIRRTGELLTYIRTLKMYGWELLFSSWLMETRSLEVKHLATRKYLDAWCVFFWATTPSLFSLCTFGLFALMGHQLDAATVFTCLALFNTLISPLNSFPWVINGLIDAIISSRRLSRFLSCPEHRRKVGENISCSSSFSSVQPDSLQDFAVSIQDACCSWSSSDEKALNMVLSHVTLSLSKGSFVAVIGEVGSGKSSMLYSILGEMRLDQGSIYSNGSIAYVPQVPWILSGTVRDNILFGKSYHPERYTDTIKACALDVDISLMAGGDMAYIGEKGVNLSGGQRARLALARVLYHDSDVIMLDDVLSAVDVQVAQWILHNAILGPLMKGKTRLLCTHNIQAISSADMIVVLDKGHVKWMGGSADFPTSSYTTFSPLNEMDSTSHNQQQSCSTNSSITKEQSLPDRILTQALEEAEDVIEVELRKEGKVELGVYKSYAAFTGWFIAVIICLSAILMQASRNGNDLWLSYWVDTTAEDGQTSNSMSFYLTILCLFCIMNSFFTLVRAFSFAFGGLQAATKVHNKLLSKLINAPVQFFDQTPGGRILNRLSSDLYTIDDSLPFIMNILLANFVGLLGIAIILSYVQVFFLVLLLPFWYIYSRLQFFYRSTSRELRRLDSVSRSPIYTSFTETLDGSSTIRAFKSEDFFFTKFSDHMILYQKTSYTETVASLWLSLRLQLLAAFIISFIALMAVVGSQGSLPISFGTPGLVGLALSYAAPIVSLLGSFLTSFTETEKEMVSIERALQVLCLDECTASVDIQTASLLQKTISSECKGMTVVTIAHRISTVINMDNILILDHGNLAEQGNPQILLKDGTSIFSSFVKASSL 1294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07576 1294 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 219 1213 - -
Vivi2g07576 1294 SUPERFAMILY ABC transporter transmembrane region 911 1214 IPR036640 GO:0005524|GO:0016020
Vivi2g07576 1294 ProSitePatterns ABC transporters family signature. 748 762 IPR017871 GO:0005524|GO:0016887
Vivi2g07576 1294 Gene3D - 599 870 IPR027417 -
Vivi2g07576 1294 FunFam ABC transporter C family member 5 878 1218 - -
Vivi2g07576 1294 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1197 1281 IPR027417 -
Vivi2g07576 1294 FunFam ABC transporter C family member 13 602 857 - -
Vivi2g07576 1294 CDD ABCC_MRP_domain1 620 823 - -
Vivi2g07576 1294 SUPERFAMILY ABC transporter transmembrane region 283 592 IPR036640 GO:0005524|GO:0016020
Vivi2g07576 1294 SMART AAA_5 650 824 IPR003593 GO:0016887
Vivi2g07576 1294 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 619 834 IPR027417 -
Vivi2g07576 1294 CDD ABC_6TM_MRP7_D2_like 914 1212 - -
Vivi2g07576 1294 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 620 847 IPR003439 GO:0005524
Vivi2g07576 1294 Pfam ABC transporter transmembrane region 296 564 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vivi2g07576 1294 Pfam ABC transporter transmembrane region 916 1165 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vivi2g07576 1294 Gene3D ABC transporter type 1, transmembrane domain 880 1218 IPR036640 GO:0005524|GO:0016020
Vivi2g07576 1294 Gene3D ABC transporter type 1, transmembrane domain 268 593 IPR036640 GO:0005524|GO:0016020
Vivi2g07576 1294 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 915 1202 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vivi2g07576 1294 FunFam ATP-binding cassette subfamily C member 10 271 593 - -
Vivi2g07576 1294 CDD ABC_6TM_MRP7_D1_like 295 584 - -
Vivi2g07576 1294 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 297 576 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vivi2g07576 1294 Pfam ABC transporter 641 773 IPR003439 GO:0005524
Vivi2g07576 1294 MobiDBLite consensus disorder prediction 845 867 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07576 Vivi-Chr2 221061742 221079663 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g07576 640 864 Calmodulin-binding Proteins AT2G36910 27.459 2.56e-19 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07576 K05674 - gmx:100814181 1948.71