Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07575 ATGGATCACTTCTTCTCTCTCATTTGCCCTAATTCTACATCTATATGGGATGGAAAAGGATTCTCCGAGTGTTTTGATGACATTGTGTTAGGTTTTGCAGTGAATGTAGTGACTATTGTTATTATTGTTGTGTTTGGATTTAGTCAAAAGATTGGTGGCTGTGGTCGTGGAGCTCAGAGATCAGACTCTCAGACGCCTCTTCCAGAGAAATTTGTCCTGGATTATGTACCACCCGTCGGAGCTTGCTTCTCAGTTTTGGAAATAATTTTCCTGCTTAAGAAAGAACATGATGGTAGCTATGTTGAATATTATAAGTGGTTATGTCATTGTTCTGAATTGTTGGTGTGGGCAAATATCATTCTCTTCACAAAGTATGCAAGGAGTCATTTCATAGTCTTCGACCGTGTCTTATGTTTCTGGTGGATTCTGAAACCAATATTGGGGATTTTCCATTTTATAACAAAGTTTCCATCATTGGAGGTGTCAGTATGCATAATGGAAAGCTTAGTAATTCTCTTGAATATATCATTTTGCATAGCTATCAATGTGATCAGGATAAAGAGATTATCTTCCAAAAGCAGTTTATTGGAAGATCCACTTCTTTCCAACGGAGGGGACCTTGAGGAAGGTGAAAATCATGACCTTGGAAATAATGGTAACTTTTGGGATTTGATGACTTTCAAATTCATAAGTCCAGTGATGAATCAAGGTGTGCTAAAGCAACTAGACTCTGGCGATCTTTTTCCACTACTATCTGATATGAGTCCTTCTTTCTGTCATGATATAATTAAATCCAGCTGGCGAGAACAATCGAGTAATTATGGTTCAAACCCTTCCTTGCTTAGAGCACTTTGTAATGCATATGGATGGCAATATCTCCGTCTTGGTTTATTGAAGGTGATAAATGACGGTATTGGTTTTGCGGGACCATTACTTCTCAATAAGCTGATCAAGTTTCTTCAACAAGGTTCAGCAAGTTGGGATGGGTATTTATTTGCACTATCCTTGGGTCTCACATCAATAATTAAATCTTTTTTAGATACACAATATACTTTTCGTCTTGCCAAACTGAAGTTAAAGCTGCGATCCAGTATCATGACTCTAATCTATGAGAAGTGTCTATTTGTGAACCTAGCAGAGCGTTCAAAATTCACAAATGGAGAAATTCAGACATTTATGTCGGTGGATGCTGACAGAACTGTTAACTTGTGTAATAGTTTTCATGATATATGGAGCCTGCCTCTACAAATTGGAGTGGCACTTTACCTTCTGTATACTCAAGTCAAATTTGCATTTGTGTCTGGGTTAGCAATAACCATTTTGTTGATACCAGTGAATAAATGGATATCAACATTGATTGCACGTGCCACTGAGCAAATGATGAAAGAGAAGGATGAAAGGATTCGTAGGACCGGGGAACTTTTGACTTATATTCGCACATTGAAGATGTATGGATGGGAACTTCTTTTTTCTAGTTGGTTAATGGAGACAAGATCTTTGGAAGTGAAACACTTAGCTACTCGGAAGTACTTGGATGCATGGTGTGTATTCTTTTGGGCTACTACACCATCGCTCTTTTCTCTTTGCACATTTGGACTCTTTGCATTGATGGGACACCAGCTTGATGCCGCAACGGTTTTCACTTGTCTTGCTTTGTTTAACACGCTGATTTCACCACTTAATTCATTCCCTTGGGTTATTAATGGATTGATTGACGCCATCATATCCTCCCGACGGCTGAGTAGGTTTCTCTCTTGCCCTGAACATAGACGCAAAGTGGGAGAGAACATTTCATGTTCATCATCATTCTCGAGTGTACAACCTGATTCCTTACAAGATTTCGCTGTCTCTATCCAAGATGCATGCTGTTCTTGGTCCAGCAGTGACGAAAAAGCATTGAATATGGTGTTGAGTCATGTGACTCTTAGCCTGTCAAAGGGTTCCTTTGTTGCAGTTATTGGAGAGGTTGGTTCCGGAAAATCGTCCATGTTATATTCAATTCTTGGAGAAATGCGGCTTGATCAAGGCTCTATTTATTCCAATGGATCTATAGCTTATGTGCCACAGGTCCCTTGGATTTTATCTGGAACAGTACGTGACAATATATTATTTGGGAAAAGCTATCATCCTGAAAGGTATACGGATACAATAAAAGCGTGTGCGTTAGATGTTGATATCTCATTGATGGCTGGTGGTGACATGGCATATATTGGAGAGAAAGGAGTCAACTTATCAGGTGGACAGAGAGCTCGTCTTGCTTTGGCAAGAGTACTGTATCATGACTCGGATGTTATCATGCTCGATGATGTCCTGAGTGCAGTTGATGTACAAGTTGCTCAGTGGATCTTGCACAATGCCATCCTTGGTCCTCTCATGAAGGGAAAAACTAGATTGCTCTGTACCCACAACATTCAGGCAATATCTTCTGCAGATATGATCGTAGTATTGGACAAAGGGCATGTAAAGTGGATGGGAGGTTCAGCTGACTTTCCAACTTCTTCATATACAACATTCTCCCCATTGAATGAAATGGATTCAACTTCACATAATCAGCAGCAATCATGCAGCACAAATTCTTCTATAACCAAGGAGCAGTCTCTTCCTGATAGAATTCTTACGCAAGCTCTAGAGGAAGCAGAGGATGTAATTGAAGTTGAATTAAGGAAAGAGGGAAAAGTTGAACTTGGAGTGTATAAGAGTTATGCTGCTTTTACTGGCTGGTTCATTGCCGTGATTATATGTCTATCTGCTATTCTGATGCAAGCTTCGCGTAATGGAAATGATTTATGGCTTTCATATTGGGTTGATACCACAGCGGAAGATGGACAAACAAGTAACTCTATGTCTTTCTATCTGACTATTCTATGTCTCTTTTGCATTATGAATTCCTTTTTCACACTGGTGAGGGCATTCTCTTTTGCATTTGGTGGTTTACAAGCGGCAACTAAGGTACACAATAAACTGCTCAGCAAGCTTATCAATGCCCCTGTGCAATTCTTTGATCAGACCCCGGGTGGAAGAATACTGAATAGGTTATCATCAGATCTTTATACAATTGATGATTCTCTCCCATTTATTATGAACATTCTCCTGGCTAATTTCGTAGGCCTGCTGGGTATTGCAATTATTTTGTCTTACGTGCAGGTCTTCTTCTTAGTTTTGTTATTGCCATTTTGGTATATCTACAGTAGACTTCAGTTCTTCTACAGGTCAACATCAAGAGAATTAAGAAGACTGGATAGTGTTTCTCGCTCTCCAATATATACATCTTTCACTGAAACACTTGATGGATCATCAACTATCCGAGCCTTTAAATCTGAGGACTTTTTCTTTACCAAATTTAGTGACCACATGATATTATATCAGAAGACTTCTTATACTGAAACAGTGGCAAGTCTGTGGCTTTCCTTGCGTCTTCAGTTATTAGCTGCATTTATAATCTCATTCATAGCCCTGATGGCTGTTGTTGGATCTCAAGGAAGTCTGCCTATCAGTTTTGGTACCCCGGGATTGGTTGGATTGGCCCTCTCATACGCAGCTCCAATTGTGTCTCTACTGGGGAGTTTTCTAACAAGTTTTACTGAAACAGAGAAGGAGATGGTTTCAATTGAAAGAGCCCTTCAAGTTCTTTGTTTGGATGAATGCACTGCCAGTGTGGACATTCAAACTGCTTCGCTGCTGCAAAAAACCATATCCAGTGAATGCAAAGGAATGACGGTGGTCACAATTGCTCACCGGATTTCAACTGTCATAAATATGGACAACATTTTAATTCTTGATCATGGAAACCTGGCTGAACAAGGAAATCCACAAATTCTTCTGAAGGATGGCACCTCTATATTTTCTAGTTTTGTTAAAGCTTCATCTCTGTAA 3873 0.3963 MDHFFSLICPNSTSIWDGKGFSECFDDIVLGFAVNVVTIVIIVVFGFSQKIGGCGRGAQRSDSQTPLPEKFVLDYVPPVGACFSVLEIIFLLKKEHDGSYVEYYKWLCHCSELLVWANIILFTKYARSHFIVFDRVLCFWWILKPILGIFHFITKFPSLEVSVCIMESLVILLNISFCIAINVIRIKRLSSKSSLLEDPLLSNGGDLEEGENHDLGNNGNFWDLMTFKFISPVMNQGVLKQLDSGDLFPLLSDMSPSFCHDIIKSSWREQSSNYGSNPSLLRALCNAYGWQYLRLGLLKVINDGIGFAGPLLLNKLIKFLQQGSASWDGYLFALSLGLTSIIKSFLDTQYTFRLAKLKLKLRSSIMTLIYEKCLFVNLAERSKFTNGEIQTFMSVDADRTVNLCNSFHDIWSLPLQIGVALYLLYTQVKFAFVSGLAITILLIPVNKWISTLIARATEQMMKEKDERIRRTGELLTYIRTLKMYGWELLFSSWLMETRSLEVKHLATRKYLDAWCVFFWATTPSLFSLCTFGLFALMGHQLDAATVFTCLALFNTLISPLNSFPWVINGLIDAIISSRRLSRFLSCPEHRRKVGENISCSSSFSSVQPDSLQDFAVSIQDACCSWSSSDEKALNMVLSHVTLSLSKGSFVAVIGEVGSGKSSMLYSILGEMRLDQGSIYSNGSIAYVPQVPWILSGTVRDNILFGKSYHPERYTDTIKACALDVDISLMAGGDMAYIGEKGVNLSGGQRARLALARVLYHDSDVIMLDDVLSAVDVQVAQWILHNAILGPLMKGKTRLLCTHNIQAISSADMIVVLDKGHVKWMGGSADFPTSSYTTFSPLNEMDSTSHNQQQSCSTNSSITKEQSLPDRILTQALEEAEDVIEVELRKEGKVELGVYKSYAAFTGWFIAVIICLSAILMQASRNGNDLWLSYWVDTTAEDGQTSNSMSFYLTILCLFCIMNSFFTLVRAFSFAFGGLQAATKVHNKLLSKLINAPVQFFDQTPGGRILNRLSSDLYTIDDSLPFIMNILLANFVGLLGIAIILSYVQVFFLVLLLPFWYIYSRLQFFYRSTSRELRRLDSVSRSPIYTSFTETLDGSSTIRAFKSEDFFFTKFSDHMILYQKTSYTETVASLWLSLRLQLLAAFIISFIALMAVVGSQGSLPISFGTPGLVGLALSYAAPIVSLLGSFLTSFTETEKEMVSIERALQVLCLDECTASVDIQTASLLQKTISSECKGMTVVTIAHRISTVINMDNILILDHGNLAEQGNPQILLKDGTSIFSSFVKASSL 1290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07575 1290 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 219 1208 - -
Vivi2g07575 1290 FunFam ABC transporter C family member 13 598 853 - -
Vivi2g07575 1290 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1193 1277 IPR027417 -
Vivi2g07575 1290 Gene3D - 595 866 IPR027417 -
Vivi2g07575 1290 CDD ABC_6TM_MRP7_D1_like 295 580 - -
Vivi2g07575 1290 SUPERFAMILY ABC transporter transmembrane region 907 1210 IPR036640 GO:0005524|GO:0016020
Vivi2g07575 1290 ProSitePatterns ABC transporters family signature. 744 758 IPR017871 GO:0005524|GO:0016887
Vivi2g07575 1290 CDD ABCC_MRP_domain1 616 819 - -
Vivi2g07575 1290 Gene3D ABC transporter type 1, transmembrane domain 268 589 IPR036640 GO:0005524|GO:0016020
Vivi2g07575 1290 FunFam ABC transporter C family member 5 874 1214 - -
Vivi2g07575 1290 Pfam ABC transporter 637 769 IPR003439 GO:0005524
Vivi2g07575 1290 SUPERFAMILY ABC transporter transmembrane region 283 588 IPR036640 GO:0005524|GO:0016020
Vivi2g07575 1290 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 911 1198 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vivi2g07575 1290 Pfam ABC transporter transmembrane region 912 1161 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vivi2g07575 1290 Pfam ABC transporter transmembrane region 296 560 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vivi2g07575 1290 FunFam Multidrug resistance-associated protein ABC domain protein 271 589 - -
Vivi2g07575 1290 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 615 830 IPR027417 -
Vivi2g07575 1290 CDD ABC_6TM_MRP7_D2_like 910 1208 - -
Vivi2g07575 1290 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 297 572 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vivi2g07575 1290 Gene3D ABC transporter type 1, transmembrane domain 885 1205 IPR036640 GO:0005524|GO:0016020
Vivi2g07575 1290 Gene3D - 1208 1289 IPR027417 -
Vivi2g07575 1290 SMART AAA_5 646 820 IPR003593 GO:0016887
Vivi2g07575 1290 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 616 843 IPR003439 GO:0005524
Vivi2g07575 1290 MobiDBLite consensus disorder prediction 841 863 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07575 Vivi-Chr2 221061742 221079663 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g07575 636 860 Calmodulin-binding Proteins AT2G36910 27.459 2.51e-19 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07575 K05674 - gmx:100814181 1954.49