Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07543 ATGGCAGATCTCAAAGAGAGGCTACTGCCACCAAAACCTGCATCGGCTTTTACTTTAAGAGAGGCTGCCAGTCGACCAACTGCCTCTGGAAGGCATCCTTTTCAAGGGGTGGATGTTTTGGAGGTCAAGAAGCGGGGCCAAGGTCTTAAATCATGGATTCGTGTTGATACGTCGGGGAACTCTCAGGTTATGGAGGTAGATAAGTTTACTATGATGAGGCGATGTGATCTTCCTGCCCGTGATCTTCGTTTGCTGGATCCTGTGTTTGTTTATCCGTCAACGATCCTTGGTAGGGAGAAGGCTATTGTTGTGAATCTGGAGCAGATACGGTGTATTATTACAGCAGACGAGGTTCTTCTCTTGAATTCGCTCGATAAATATGTATTGCAATATGTGATTGATCTCCAACGAAAGTTGACGACGACTGGGGCTGGCGAGGCTGGCGACGTAGGCGAGGTCTGGCAATCAGACAATTCTGACATGAACCAAAGGAGAGGCAATAGGAATTTTGAAAATTTATATAGCAACACTTCCCCTGATTATTTGCCTTTTGAATTCAGGGCTCTTGAAGTTGCCCTCGAGGCAGCATGCACATTTCTTGACACCCAGGCGGCAGAGTTAGAAATTGAGGCCTATCCGTTACTGGATGAACTGACATCAAAGATCAGTACTCTTAATTTGGAACGTGTTCGTCGGTTGAAAAGCAGACTTGTTGCCTTGACTAGGAGAGTTCAGAAGGTTAGAGATGAAATAGAGCAGCTTATGGATGATGATGGTGATATGGCTGAAATGTACCTTACCGAGAAGAAAAGCCGGATGGAATTGTCATTTTATGGAGATCAGTCTATGATTGGATATAGATCAGCTGATGGTACATCCGTCTCTGCTCCAGTTTCTCCTGTTTCATCACCACCCGATTCTCGGAGGCTTGATAAGAGCTTGAGCATGGCTAGGAGTCGACACGAAAGCATGAGGAGTACTGAAAGTAATACAGAAAATATAGAAGAGCTTGAAATGTTGTTAGAAGCATACTTTGTTGTCATTGACAGCTCGCTAAACAAGTTGACATCGCTAAAAGAATACATCGATGACACAGAAGATTTCATCAACATTCAACTGGATAATGTGCGGAATCAACTAATCCAATTTGAGCTTTTGCTCACAACTGCAACATTTGTGGTTGCAATCTTTGGAGTGGTGGCAGGAGTATTTGGGATGAACTTTGAAATTCCATTATTTGATGTCCCATCTGCATTCCAATGGGTCCTTGTAATAACAGGAGTCGTCGGAGTTTGTATATTTTCTGCATTCGTATGGTTCTTCAAATACAGAAGACTCATGCCGCTTTAG 1350 0.4363 MADLKERLLPPKPASAFTLREAASRPTASGRHPFQGVDVLEVKKRGQGLKSWIRVDTSGNSQVMEVDKFTMMRRCDLPARDLRLLDPVFVYPSTILGREKAIVVNLEQIRCIITADEVLLLNSLDKYVLQYVIDLQRKLTTTGAGEAGDVGEVWQSDNSDMNQRRGNRNFENLYSNTSPDYLPFEFRALEVALEAACTFLDTQAAELEIEAYPLLDELTSKISTLNLERVRRLKSRLVALTRRVQKVRDEIEQLMDDDGDMAEMYLTEKKSRMELSFYGDQSMIGYRSADGTSVSAPVSPVSSPPDSRRLDKSLSMARSRHESMRSTESNTENIEELEMLLEAYFVVIDSSLNKLTSLKEYIDDTEDFINIQLDNVRNQLIQFELLLTTATFVVAIFGVVAGVFGMNFEIPLFDVPSAFQWVLVITGVVGVCIFSAFVWFFKYRRLMPL 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07543 449 FunFam Magnesium transporter MRS2-1 40 123 - -
Vivi2g07543 449 Gene3D - 37 123 - -
Vivi2g07543 449 MobiDBLite consensus disorder prediction 290 309 - -
Vivi2g07543 449 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 386 439 IPR045863 -
Vivi2g07543 449 CDD Mrs2_Mfm1p-like 52 446 IPR039204 -
Vivi2g07543 449 Coils Coil 230 257 - -
Vivi2g07543 449 Pfam CorA-like Mg2+ transporter protein 325 441 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Vivi2g07543 449 MobiDBLite consensus disorder prediction 290 329 - -
Vivi2g07543 449 MobiDBLite consensus disorder prediction 311 329 - -
Vivi2g07543 449 Gene3D Magnesium transport protein CorA, transmembrane region 125 380 - -
Vivi2g07543 449 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 22 447 IPR039204 -
Vivi2g07543 449 FunFam Magnesium transporter MRS2-1 387 447 - -
Vivi2g07543 449 Gene3D Magnesium transport protein CorA, transmembrane region 387 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07543 Vivi-Chr2 220526751 220530403 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g07543 1 449 MRS2 Gene Family AT1G16010 82.889 0.0 747
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07543 K16075 - gmx:100779803 734.176