Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07540 ATGAGTGAGTGCAGCACCTGGCATCACCAAATTTCAACCCACGCTCTTTCATTTCATCATTCTTCGCTTCCTTTTTCGGTAATATTTTGTAGTAGCAGCAGAGCAGCGATGTTGATCAACGTGAAAAACTCGACGATGGTGCGTCCGGCGGAGGAGACACCGCGAACCGCCTTATGGAACTCCAACGTTGATTTGGTGGTTCCGAATTTTCACACTCCCAGCGTCTACTTTTACAGACCAAACGGCGCGTCCAATTTCTTCGACGCTAACGTCATGAAGGAGGCTCTGAGCAAGGTGCTGGTTCCGTTCTATCCAATGGCAGCTCGTCTCCGCCGTGACGACGACGGTCGTGTTGAGCTTTACTGCGACGGTCAGGGAGTGCTTTTCGTTGAGGCTGAGACAACTGCAACGGTTGATGATTTTGGAGACTTCGCTCCCACGCTTCGATTACGTGAGTTGATCCCAGCCGTTGATTATTCTGCCGGTATTGAAACGTATGCACTGTTAGTGTTGCAGGTAACATATTTCAAATGTGGAGGAGTTTCCTTAGGAGTTGGTATGCAACACCATGTGGCTGATGGAGCCTCTGGTCTTCACTTCATCAATTCATGGTCTGATATGGCTCGTGGCATTGATGTTTCCGTTTCACCGTTCATTGACAGAACATTGCTCCATGCTCGGGATCCACCTCGACCTGTTTTTGATCACATTGAATACAAACCTCCACCAGCAATGAAAACTGGTCATCCCTTGCTGCAACCTGCAAAACCAGACTCAGATGCTACTGCTGCAGTGTCGATCTTCAAATTAACCCGTGACCAACTCAATATCTTGAAGGGTAAGTCCAAAGAAGATGGAAACACTATCACCTATAGCTCTTATGAGATGTTGGCAGGTCATGTATGGAGAAGTGTAAGCAAAGCAAGAGCACTTCCTGATGATCAAGAAACAAAACTGTACATTGCAACAGATGGAAGATCAAGGCTTCAACCTCCACTTCCACAAGGTTACTTTGGCAATGTGATATTCACTACAACTCCAATAGCTGTGGCAGGGGATTTAATGTCAAAACCAACATGGTATGCTGCTAGCAGAATCCACGATGCATTGTTACGAATGGATAATGATTATTTGAGATCTGCTTTGGACTATCTTGAGCTACAACCTGATTTAAAAGCTCTTGTTCGTGGAGCACATACTTTTAAGTGTCCAAATCTTGGTATCACTAGCTGGGCAAGGTTACCGATTCATGATGCGGACTTTGGTTGGGGAAGACCTATATTCATGGGACCTGGTGGAATTGCATATGAAGGACTATCTTTCATCATTCCAAGCTCAACAAATGATGGTAGCTTGTCTGTGGCAATTGCTCTGCCTCCAGAGCAGATGAAATTGTTTCAAGAATTTTTTTATGATATTTGA 1422 0.4522 MSECSTWHHQISTHALSFHHSSLPFSVIFCSSSRAAMLINVKNSTMVRPAEETPRTALWNSNVDLVVPNFHTPSVYFYRPNGASNFFDANVMKEALSKVLVPFYPMAARLRRDDDGRVELYCDGQGVLFVEAETTATVDDFGDFAPTLRLRELIPAVDYSAGIETYALLVLQVTYFKCGGVSLGVGMQHHVADGASGLHFINSWSDMARGIDVSVSPFIDRTLLHARDPPRPVFDHIEYKPPPAMKTGHPLLQPAKPDSDATAAVSIFKLTRDQLNILKGKSKEDGNTITYSSYEMLAGHVWRSVSKARALPDDQETKLYIATDGRSRLQPPLPQGYFGNVIFTTTPIAVAGDLMSKPTWYAASRIHDALLRMDNDYLRSALDYLELQPDLKALVRGAHTFKCPNLGITSWARLPIHDADFGWGRPIFMGPGGIAYEGLSFIIPSSTNDGSLSVAIALPPEQMKLFQEFFYDI 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07540 473 Gene3D - 33 241 IPR023213 -
Vivi2g07540 473 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 44 470 - -
Vivi2g07540 473 FunFam Tryptamine hydroxycinnamoyl transferase 252 471 - -
Vivi2g07540 473 Pfam Transferase family 39 471 - -
Vivi2g07540 473 FunFam Spermidine hydroxycinnamoyl transferase 37 239 - -
Vivi2g07540 473 Gene3D - 255 473 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07540 Vivi-Chr2 220448220 220453445 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g07540 37 473 Monolignol Biosynthesis Gene Families AT5G48930 76.430 0.0 704
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07540 K13065 - gmx:100801923 793.497