Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07539 ATGTTGATCAACGTGAAAAACTCGACGATGGTGCGTCCGGCGGAGGAGACACCGCGAACCGCCTTATGGAACTCCAACGTTGATTTGGTGGTTCCGAATTTTCACACTCCCAGCGTCTACTTTTACAGACCAAACGGCGCGTCCAATTTCTTCGACGCTAACGTCATGAAGGAGGCTCTGAGCAAGGTGCTGGTTCCGTTCTATCCAATGGCAGCTCGTCTCCGCCGTGACGACGACGGTCGTGTTGAGCTTTACTGCGACGGTCAGGGAGTGCTTTTCGTTGAGGCTGAGACAACTGCAACGGTTGATGATTTTGGAGACTTCGCTCCCACGCTTCGATTACGTGAGTTGATCCCAGCCGTTGATTATTCTGCCGGTATTGAAACGTATGCACTGTTAGTGTTGCAGGTAACATATTTCAAATGTGGAGGAGTTTCCTTAGGAGTTGGTATGCAACACCATGTGGCTGATGGAGCCTCTGGTCTTCACTTCATCAATTCATGGTCTGATATGGCTCGTGGCATTGATGTTTCCGTTTCACCGTTCATTGACAGAACATTGCTCCATGCTCGGGATCCACCTCGACCTGTTTTTGATCACATTGAATACAAACCTCCACCAGCAATGAAAACTGGTCATCCCTTGCTGCAACCTGCAAAACCAGACTCAGATGCTACTGCTGCAGTGTCGATCTTCAAATTAACCCGTGACCAACTCAATATCTTGAAGGGTAAGTCCAAAGAAGATGGAAACACTATCACCTATAGCTCTTATGAGATGTTGGCAGGTCATGTATGGAGAAGTGTAAGCAAAGCAAGAGCACTTCCTGATGATCAAGAAACAAAACTGTACATTGCAACAGATGGAAGATCAAGGCTTCAACCTCCACTTCCACAAGGTTACTTTGGCAATGTGATATTCACTACAACTCCAATAGCTGTGGCAGGGGATTTAATGTCAAAACCAACATGGTATGCTGCTAGCAGAATCCACGATGCATTGTTACGAATGGATAATGATTATTTGAGATCTGCTTTGGACTATCTTGAGCTACAACCTGATTTAAAAGCTCTTGTTCGTGGAGCACATACTTTTAAGTGTCCAAATCTTGGTATCACTAGCTGGGCAAGGTTACCGATTCATGATGCGGACTTTGGTTGGGGAAGACCTATATTCATGGGACCTGGTGGAATTGCATATGAAGGACTATCTTTCATCATTCCAAGCTCAACAAATGATGGTAGCTTGTCTGTGGCAATTGCTCTGCCTCCAGAGCAGATGAAATTGTTTCAAGAATTTTTTTATGATATTTGA 1314 0.4528 MLINVKNSTMVRPAEETPRTALWNSNVDLVVPNFHTPSVYFYRPNGASNFFDANVMKEALSKVLVPFYPMAARLRRDDDGRVELYCDGQGVLFVEAETTATVDDFGDFAPTLRLRELIPAVDYSAGIETYALLVLQVTYFKCGGVSLGVGMQHHVADGASGLHFINSWSDMARGIDVSVSPFIDRTLLHARDPPRPVFDHIEYKPPPAMKTGHPLLQPAKPDSDATAAVSIFKLTRDQLNILKGKSKEDGNTITYSSYEMLAGHVWRSVSKARALPDDQETKLYIATDGRSRLQPPLPQGYFGNVIFTTTPIAVAGDLMSKPTWYAASRIHDALLRMDNDYLRSALDYLELQPDLKALVRGAHTFKCPNLGITSWARLPIHDADFGWGRPIFMGPGGIAYEGLSFIIPSSTNDGSLSVAIALPPEQMKLFQEFFYDI 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07539 437 FunFam Tryptamine hydroxycinnamoyl transferase 216 435 - -
Vivi2g07539 437 Gene3D - 219 437 IPR023213 -
Vivi2g07539 437 FunFam Spermidine hydroxycinnamoyl transferase 1 203 - -
Vivi2g07539 437 Pfam Transferase family 3 435 - -
Vivi2g07539 437 Gene3D - 1 205 IPR023213 -
Vivi2g07539 437 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 8 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07539 Vivi-Chr2 220448220 220453454 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g07539 1 437 Monolignol Biosynthesis Gene Families AT5G48930 76.430 0.0 702
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07539 K13065 - gmx:100801923 793.497