Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07537 ATGAGTGAGTGCAGCACCTGGCATCACCAAATTTCAACCCACGCTCTTTCATTTCATCATTCTTCGCTTCCTTTTTCGGTAATTAGCAGCAGAGCAGCGATGTTGATCAACGTGAAAAACTCGACGATGGTGCGTCCGGCGGAGGAGACACCGCGAACCGCCTTATGGAACTCCAACGTTGATTTGGTGGTTCCGAATTTTCACACTCCCAGCGTCTACTTTTACAGACCAAACGGCGCGTCCAATTTCTTCGACGCTAACGTCATGAAGGAGGCTCTGAGCAAGGTGCTGGTTCCGTTCTATCCAATGGCAGCTCGTCTCCGCCGTGACGACGACGGTCGTGTTGAGCTTTACTGCGACGGTCAGGGAGTGCTTTTCGTTGAGGCTGAGACAACTGCAACGGTTGATGATTTTGGAGACTTCGCTCCCACGCTTCGATTACGTGAGTTGATCCCAGCCGTTGATTATTCTGCCGGTATTGAAACGTATGCACTGTTAGTGTTGCAGGTAACATATTTCAAATGTGGAGGAGTTTCCTTAGGAGTTGGTATGCAACACCATGTGGCTGATGGAGCCTCTGGTCTTCACTTCATCAATTCATGGTCTGATATGGCTCGTGGCATTGATGTTTCCGTTTCACCGTTCATTGACAGAACATTGCTCCATGCTCGGGATCCACCTCGACCTGTTTTTGATCACATTGAATACAAACCTCCACCAGCAATGAAAACTGGTCATCCCTTGCTGCAACCTGCAAAACCAGACTCAGATGCTACTGCTGCAGTGTCGATCTTCAAATTAACCCGTGACCAACTCAATATCTTGAAGGGTAAGTCCAAAGAAGATGGAAACACTATCACCTATAGCTCTTATGAGATGTTGGCAGGTCATGTATGGAGAAGTGTAAGCAAAGCAAGAGCACTTCCTGATGATCAAGAAACAAAACTGTACATTGCAACAGATGGAAGATCAAGGCTTCAACCTCCACTTCCACAAGGTTACTTTGGCAATGTGATATTCACTACAACTCCAATAGCTGTGGCAGGGGATTTAATGTCAAAACCAACATGGTATGCTGCTAGCAGAATCCACGATGCATTGTTACGAATGGATAATGATTATTTGAGATCTGCTTTGGACTATCTTGAGCTACAACCTGATTTAAAAGCTCTTGTTCGTGGAGCACATACTTTTAAGTGTCCAAATCTTGGTATCACTAGCTGGGCAAGGTTACCGATTCATGATGCGGACTTTGGTTGGGGAAGACCTATATTCATGGGACCTGGTGGAATTGCATATGAAGGACTATCTTTCATCATTCCAAGCTCAACAAATGATGGTAGCTTGTCTGTGGCAATTGCTCTGCCTCCAGAGCAGATGAAATTGTTTCAAGAATTTTTTTATGATATTTGA 1413 0.4536 MSECSTWHHQISTHALSFHHSSLPFSVISSRAAMLINVKNSTMVRPAEETPRTALWNSNVDLVVPNFHTPSVYFYRPNGASNFFDANVMKEALSKVLVPFYPMAARLRRDDDGRVELYCDGQGVLFVEAETTATVDDFGDFAPTLRLRELIPAVDYSAGIETYALLVLQVTYFKCGGVSLGVGMQHHVADGASGLHFINSWSDMARGIDVSVSPFIDRTLLHARDPPRPVFDHIEYKPPPAMKTGHPLLQPAKPDSDATAAVSIFKLTRDQLNILKGKSKEDGNTITYSSYEMLAGHVWRSVSKARALPDDQETKLYIATDGRSRLQPPLPQGYFGNVIFTTTPIAVAGDLMSKPTWYAASRIHDALLRMDNDYLRSALDYLELQPDLKALVRGAHTFKCPNLGITSWARLPIHDADFGWGRPIFMGPGGIAYEGLSFIIPSSTNDGSLSVAIALPPEQMKLFQEFFYDI 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07537 470 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 41 467 - -
Vivi2g07537 470 Gene3D - 252 470 IPR023213 -
Vivi2g07537 470 Gene3D - 30 238 IPR023213 -
Vivi2g07537 470 FunFam Spermidine hydroxycinnamoyl transferase 34 236 - -
Vivi2g07537 470 FunFam Tryptamine hydroxycinnamoyl transferase 249 468 - -
Vivi2g07537 470 Pfam Transferase family 36 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07537 Vivi-Chr2 220448220 220453472 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g07537 34 470 Monolignol Biosynthesis Gene Families AT5G48930 76.430 0.0 704
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07537 K13065 - gmx:100801923 793.497