Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07523 ATGCATATGGAGATTGCAGCTGCATTGATAATAGTGTTATTGATCTCATACAATGCAGCTGCAGGTAGTAGTAGTTTTAGTATTACAGTTTCGAAAGATAGGAATAGTGGAAATTATGCAACAGTTGGTGAAGCTATCGCGAATGCACCAGATGTGAGTCAAAAACCTTACACAATTCACGTTCTAGCAGGCATTTATCAAGAGTACATTCTCATTCCATCCACTAAGACTAATATTCACCTTTTAGGGGATGGTCCAAATCACACAATCATTCTTGCCAACCAAAATGGCTCCACAATAGACATCCGAGGAGAAGGGTTCATGGCACAAAACATTGGATTTAAAAACTCAGCAGGACTAGATGCAAGCGCTGCAGTGGCTGTTCGAAACGAAGCAAACAATAGCATTTTCTTTCAATGCTCCATCCAAGGTTTCCAAGACACCTTATGGGCTGTGTCCGGAAGACAATTCTACAAAAACTGTGACATCTACGGTACCGTCGACTTCATCTACGGCAACGCTGCTGCTGTATTCCAAGACTGCATGATTTACGCACGTTATCGACGTTTTGTAACATTCACGGCTCAGTCACGTGAGAGTCCATATGAGAAGACAGGTTTCACATTCCAACGTTGTAGTTTTACTATGTCACCGGAAGATGAGGACAGAAAGTCAGAGGTACGTGCTACGTTGGGTCGTCCTTTGAGAAACTATTCGACTGTGGCTATATTGCAGTGTTACATTGATTCCATGGTGGATCCTAGAGGTTGGGAAGAGATGCGGGGGCAGGGTAATGATAAGGTTACCTATGTGGAGTTTGAGAATGTTGGACCTGGATCAAACACGGATGGTAGAGTAGATTGGCCTGGTGTTAGAGTTCTTGGTAACCATAATCAAGCACTTGTTTTCACTCCTTCCTATTTCTTGGATGCTGACTCTTGGATTCCTATTAAAGGTGTTCCTTATGACACTGGACTATAA 981 0.4271 MHMEIAAALIIVLLISYNAAAGSSSFSITVSKDRNSGNYATVGEAIANAPDVSQKPYTIHVLAGIYQEYILIPSTKTNIHLLGDGPNHTIILANQNGSTIDIRGEGFMAQNIGFKNSAGLDASAAVAVRNEANNSIFFQCSIQGFQDTLWAVSGRQFYKNCDIYGTVDFIYGNAAAVFQDCMIYARYRRFVTFTAQSRESPYEKTGFTFQRCSFTMSPEDEDRKSEVRATLGRPLRNYSTVAILQCYIDSMVDPRGWEEMRGQGNDKVTYVEFENVGPGSNTDGRVDWPGVRVLGNHNQALVFTPSYFLDADSWIPIKGVPYDTGL 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07523 326 Gene3D - 23 326 IPR012334 -
Vivi2g07523 326 PANTHER PECTINESTERASE 28 316 - -
Vivi2g07523 326 FunFam Pectinesterase 4 24 326 - -
Vivi2g07523 326 SUPERFAMILY Pectin lyase-like 24 324 IPR011050 -
Vivi2g07523 326 Pfam Pectinesterase 28 312 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07523 Vivi-Chr2 220204412 220207258 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g07523 14 326 Carbohydrate Esterase AT3G05610 40.184 1.85e-78 250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07523 K01051 - gmx:102665195 437.573