Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07518 ATGGGTTCTGTATCTGCGGAGCACAAGATGGACACTGATTTCGACGAAGAAACTCCTCTCAGTTCTTCACCCTCTTCTTCTTCTCCTCATACTACTGCCGCATCTAAACCTCATACTTTTCATTTCGATTCATCACTTCCTTTGCCCAAATCATCTTCTTTTTCTTCTTTCTTAAACCATTCTTCCACGAGACGAATCAGTAGGAGTATTTATATTGTTTTAATCAAAGCTAAGATCAACCTCTTGTTACCTTTTGGCCCCTTGGCTATCTTCCTACATTATTTCACCGCTAAACATGTTTGGGTTTTCTTCTTCGCTTTATTGGGTATTGCCCCATTGGCCGAACGTCTCGGTTATGCCACTGAACAACTTGCCTTCTACACCGGATCAACAGTTGGGGGTTTGCTGAATGCTACATTTGGAAATGCAACTGAAATGATTATATCAATTTATGCGTTGAAAAGCGATATGATTAGGGTTGTTCAGCAATCTTTACTTGGTTCTATCTTGTCTAATATGCTTCTAGTTCTTGGATGTGCATTCTTTACTGGTGGGATTGTTCACTACCAAAAACTTCAGGTTTTCAATAAGGCAGCTGCTGTTGTCAATTCGGGGTTATTGTTGATGGCTGTTATGGGAATACTGTTTCCTGCTGTGCTTCATTTTACTCACTCGGAGGTTCATCTTGGGAAGTCAGTGTTATCGTTATCGAGGTTTAGTAGCTGCATAATGCTAGTGGCCTATGCAAGCTACCTTTTCTTTCAACTTAAAAGTCAACAAAATTTTTATACTCCAGTTGACGAGGAAGTAGATACAAGTGAAAACACTGATGAGGAGGAAGAGCTCGAGTTAACTAAGTGGGAAGCAATTATCTGGCTTGGTATTTTGACAGTATGGGTATCAGTATTATCTGGATACCTTGTGGATGCCATAGAGGGAGCATCTGAATCCTTGAATATGTCAGTGGCTTTTATTAGCGTCATCTTGCTTCCAATAGTTGGAAATGCTGCAGAGCATGCAAGTGCTATCATGTTTGCCGTAAAGGACAAGCTAGATATCACAATTGGAGTTGCTGTTGGATCATCAACCCAGATATCGATGTTTGTGATCCCTTTCTGTGTGGTTGTTGGATGGTGCATGGGAAAAGAAATGGACTTGAATTTTCAACTCTTTGAGACTGCCACACTTTTTATCACTGTGCTGGTAGTTGCATTTATGATGCAGGAAGGGACCTCGAACTATTTTAAAGGCTTGATGCTTATTCTATGCTATCTTATAGTTGCTGCCAGTTTTTTTGTACATGTCGACCCTAAAAGTGATGATGACTAA 1329 0.4033 MGSVSAEHKMDTDFDEETPLSSSPSSSSPHTTAASKPHTFHFDSSLPLPKSSSFSSFLNHSSTRRISRSIYIVLIKAKINLLLPFGPLAIFLHYFTAKHVWVFFFALLGIAPLAERLGYATEQLAFYTGSTVGGLLNATFGNATEMIISIYALKSDMIRVVQQSLLGSILSNMLLVLGCAFFTGGIVHYQKLQVFNKAAAVVNSGLLLMAVMGILFPAVLHFTHSEVHLGKSVLSLSRFSSCIMLVAYASYLFFQLKSQQNFYTPVDEEVDTSENTDEEEELELTKWEAIIWLGILTVWVSVLSGYLVDAIEGASESLNMSVAFISVILLPIVGNAAEHASAIMFAVKDKLDITIGVAVGSSTQISMFVIPFCVVVGWCMGKEMDLNFQLFETATLFITVLVVAFMMQEGTSNYFKGLMLILCYLIVAASFFVHVDPKSDDD 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07518 442 Pfam Sodium/calcium exchanger protein 99 256 IPR004837 GO:0016020|GO:0055085
Vivi2g07518 442 Pfam Sodium/calcium exchanger protein 290 429 IPR004837 GO:0016020|GO:0055085
Vivi2g07518 442 NCBIfam calcium/proton exchanger 82 432 IPR004798 GO:0006816|GO:0015369
Vivi2g07518 442 MobiDBLite consensus disorder prediction 1 38 - -
Vivi2g07518 442 MobiDBLite consensus disorder prediction 17 38 - -
Vivi2g07518 442 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 36 437 IPR004713 GO:0006812|GO:0008324|GO:0016020
Vivi2g07518 442 FunFam Vacuolar cation/proton exchanger 277 433 - -
Vivi2g07518 442 Gene3D - 276 433 IPR044880 -
Vivi2g07518 442 Gene3D - 129 272 IPR044880 -
Vivi2g07518 442 FunFam Vacuolar cation/proton exchanger 130 269 - -
Vivi2g07518 442 NCBIfam calcium/proton exchanger 73 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07518 Vivi-Chr2 220157680 220163631 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g07518 51 441 Antiporters AT1G55730 73.980 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07518 K07300 - gmx:100806000 659.062