Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07513 ATGGGCGCGCGCTCTAATTCGATTGTGCGCGCACCTACAGCATTCAATAATGTCAAGCTTGTGGCTGTTTTTGTATTATTATTACTACTTTCATATAAAGGCGTATCAATATCATCTTCTGATGTTGATGCACTATTGATGTTCAAGAAATCATTGAGAAATGTGGTGTCCCTTAGCAGTTGGGATCCATCCATAAACCCCAAACCACCATGCTCTGGAAATATTCCAAATTGGGTGGGATTATTTTGTTTGAATGATAGGGTGTGGGGGATACGCCTTGAAAGCATGGGTTTAACCGGTAATATTGACTTGGAATCTCTTTCTTCAATGTCTGCATTGCGAACACTTAGTTTGATGAACAATACTTTTGTGGGTCCATTGCCTAACATCAAGATGTTGCCCAATTTGAGGGCCCTTTACTTGTCTTATAATCATTTCTCAGGATTGATACCCGATAATGCATTTGTGGATTTGCATAGATTGAGGAAATTGTATTTGTCTAATAATGAGTTCAGTGGTAAGATCCCATCATCTTTATCCACTTTGCCTATCCTCGTCGTCCTCAGGCTTGATTCAAACAAGTTTAAAGGTGAGATACCTAATTTTGAACACAAGAATAGCCTTAAGATTGTCAACTTCTCTAACAATGAATTAGAGGGTCCTATCCCTCCTATTCTAACAACTTTTGATCCATCTTCCTTTAGTGGAAACATGCTTTTATGTGGCCCACCTTTGACAAACGTGTGTCCATCAGGGAAGGAGAATAGTATTCTGTCCAAAATAATTGTTATGAATATTTTACTTATAGTGATTACGATAGCATTTATAATATCCATTATGGTTTCAATATTGATCATATGTCGCTTGAGGTCCCAAAGGAAACAATTAGCTGATGAGAATCCTTCAACAAGTTCACAATTACACATGCAAGCTTCCAATAAATATGTTAAGCCTCCTGCCATTTATGTGAAAACGAAAAGTTTGGCCGATCACTATGATCCCAATAGTCCTAAACCAGACCAGCCTAGCCATGGTAATTCCAAAAAAGGGGAGCAAGGGAAGCTTATATTTCTAAGTCAAGATGGAATAGTCTTTGATTTACAAGATTTGTTAAGGTCCTCCGCAGAAATTCTAGGTAGTGCCTCATTTGGGTCATCATACAAAGCCGTGATTTTGGACGGTCAAGCCGTTGTTGTAAAGAGGTATAAGAAAATGAATAATGTGCCAAGAGAAGAGTTCCATGAGCATATGAGAAGGATAGGAAACCTCAACCACCCCAATGTTCTACCTTTACTTGCTTTTTATTATAGAAGAGAAGAGAAACTTTTGATATCATCCTTTGTTCATAACGGTTGCTTGGCTAGTCATCTTCATGGTAATCACAGCTCCCAGAAGCCAGGACTTGATTGGACGACCCGTTTGAAAATTGTTAAAGGTGTATCTAGGGGTTTGTCTTATCTATATAGTGCACTTCCAAGTGTGATTGTTCCTCATGGTCATCTCAAATCTTCTAATGTACTTTTAGATGAATCCTTTGAACCATTAATCACTGATTATGCCCTCAGTCCATTGATAAATCTTGATCATGCCCAACAAATCATAATGCCTTATAAATCCCCAGAGTATGCCCAACTTGGTCGCATTACAAAGAAAACAGACGTATGGAGTTTTGGGATTCTAATATTGGAGATCCTAACAGGTAAATTCCCAGAGAACTATATTACGCCCAAGTATAATAGTGATTCTGATTTAGCAAGTTGGGTAAATATGATGATTACCGAGAAGCGCACAAGTGATATATTTGATATAGATATGGGAGGAGTCGGAGATAGTAAATCTGAATTGCTTAAACTATTAAAGATTGGACTTAGTTGTTGTGAGGAAAATGTAGAAAGAAGGTTGGACATCAAAGAGGCTCTTGTGCAGATAGAAGACTTGAAAGAGGGTGAGATAATTGATCGTATTGGACTTGGAGAATACTCTTCCTCCCTTAACACAAATGAAAGGGATGCTTACAGAGCTGTGTGA 2028 0.3821 MGARSNSIVRAPTAFNNVKLVAVFVLLLLLSYKGVSISSSDVDALLMFKKSLRNVVSLSSWDPSINPKPPCSGNIPNWVGLFCLNDRVWGIRLESMGLTGNIDLESLSSMSALRTLSLMNNTFVGPLPNIKMLPNLRALYLSYNHFSGLIPDNAFVDLHRLRKLYLSNNEFSGKIPSSLSTLPILVVLRLDSNKFKGEIPNFEHKNSLKIVNFSNNELEGPIPPILTTFDPSSFSGNMLLCGPPLTNVCPSGKENSILSKIIVMNILLIVITIAFIISIMVSILIICRLRSQRKQLADENPSTSSQLHMQASNKYVKPPAIYVKTKSLADHYDPNSPKPDQPSHGNSKKGEQGKLIFLSQDGIVFDLQDLLRSSAEILGSASFGSSYKAVILDGQAVVVKRYKKMNNVPREEFHEHMRRIGNLNHPNVLPLLAFYYRREEKLLISSFVHNGCLASHLHGNHSSQKPGLDWTTRLKIVKGVSRGLSYLYSALPSVIVPHGHLKSSNVLLDESFEPLITDYALSPLINLDHAQQIIMPYKSPEYAQLGRITKKTDVWSFGILILEILTGKFPENYITPKYNSDSDLASWVNMMITEKRTSDIFDIDMGGVGDSKSELLKLLKIGLSCCEENVERRLDIKEALVQIEDLKEGEIIDRIGLGEYSSSLNTNERDAYRAV 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07513 675 MobiDBLite consensus disorder prediction 331 350 - -
Vivi2g07513 675 Pfam Protein tyrosine and serine/threonine kinase 376 575 IPR001245 GO:0004672|GO:0006468
Vivi2g07513 675 Pfam Leucine rich repeat 134 195 IPR001611 GO:0005515
Vivi2g07513 675 FunFam pollen receptor-like kinase 1 341 447 - -
Vivi2g07513 675 Gene3D Phosphorylase Kinase; domain 1 346 447 - -
Vivi2g07513 675 SUPERFAMILY L domain-like 68 251 - -
Vivi2g07513 675 FunFam Nuclear pore complex protein NUP107 38 201 - -
Vivi2g07513 675 Gene3D Ribonuclease Inhibitor 129 250 IPR032675 -
Vivi2g07513 675 FunFam Pollen receptor-like kinase 1 448 655 - -
Vivi2g07513 675 Gene3D Transferase(Phosphotransferase) domain 1 448 654 - -
Vivi2g07513 675 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 27 647 IPR046959 -
Vivi2g07513 675 ProSiteProfiles Protein kinase domain profile. 372 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g07513 675 SUPERFAMILY Protein kinase-like (PK-like) 375 644 IPR011009 -
Vivi2g07513 675 Pfam Leucine rich repeat N-terminal domain 39 83 IPR013210 -
Vivi2g07513 675 Gene3D Ribonuclease Inhibitor 33 125 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07513 Vivi-Chr2 220004331 220006775 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g07513 35 665 Receptor kinase-like Gene Family AT1G50610 47.121 0.0 565
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Vivi2g07513 PK_Tyr_Ser-Thr 9.3e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07513 - - gmx:100801053 924.08