Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07512 ATGAGAGCAGTGTTGTGTGGCAGAAAAAAACAAAAACATAGTATGTGGGTTCATCATCATAATCATCATAATCATGCTAAACCAGCCTCTGCTATTAAAAAGGGAGCTGGTAATGGATTGGTTGCCGTCGCCATTGATAAAGATAAAGGTAGCCAATATGCTCTTAAATGGGCTGCTGATACTCTTCTCACCCGAGGCCAAACCGTTATTCTATTACATGTTTCTCATCCCTCTTCCTCTTCTTCTTCAAGAGGTAACGAGGACGCCATTGTATGTAACGTTAACAGTGCTGCTTCTGCATCTCCACAAAGAAACCAAATTGATAATGCTACTAGAGATCTCTTTCTTACTTTCCATTGCTATTGCACGCGAAAAGATATAAATTGTCTTGACGTTCTACTTGAGGACAATGATGTTGTCAAGGCAGTAACCGAATATGTCGCTTATGCTGCAATTGAGAATTTGGTGGTTGGTGCACCTTCAAGGCACGGATTTATCAGACCTCCTTTTTTGTGCAGATTTAAGACATCAACTACGCCAAGTAGTATATCAAAGGGGGCGCCAGATTTCTGTACCGTTTATGTCTTATCTAAGGGCAAACCCTCATCTGTTCGGACGGCTTCTCGTCAAGCTCCACATACCTCTCCACTTCTCGTTCATATAAATAAACATTTTAATAATCATGATATAAATCAACCTGCGGAGCAGATATGCTCTAGACGTATGAATTTGAGAGATAGACCGTCAATGAAACCTCATGGCTGGCAGGATGAATCTATGAAGTCTACGTTTGGAAGAGCAGGAAGAGGCACAAGTGGAATGATATGCATGGACTTCACAGAATCAGATACAGACATATCATTTGTAAGCTCTGGGAGGCCGAGCAGTGCTTGTTCATCCTCTATTTACGATTACATGGATTCCGCTCGAACTTCACGAGTTTCTACCAGTTCAGATCGTAGCTTTGGATCCAATCGATTGGGACTCAAGTTCAATGACCCCGGTTCGCCAGATACCTCCTTTTCACTTGAAAGCGGTAGAACATCATGTTCATCTCACACCTTGGATGACGCAGAAGCTGATATGAGGAGGCTGAAGCTTGAGTTAAAACAAACTATGGATATGTACAGTACAGCATGCAGAGAAGCACTTACAGCACAACATAAGTTAATGGAGATGAGCCACTGGAAAATGGAGGAAGAAAAGAAATTAGAACAGGCAGAATTGGCCCAAGAAGCTGCGCTGGCAATTGCTGAGAGAGAGAAAGCAAGAAGTAAGGCAGCCATGGAAGCAGCTGAAGCAGCTAGAAAGATTGCAAACGTGGAATTAAAACGAAGATCAACTGTTGAAGTGAAAGCTTGTAAAGAAACGGAGGAACTGAGGAAGCTATTGGATAATTTAGGCCAAACTGATGTGAGATATAGGAGATACTCTATTGAGGAGATTGAAGTAGCCACACACATGTTTTCTGAAAAACAAATAATTGGGGAAGGTGGTTATGGCCCTGTTTATAAATGTTACCTTGATCACACCCCAGTGGCCGTCAAGGTTTTACGTCCAGATGCAGCTCAAGGGAAATCTCAGTTTCAACAAGAGGTTGACATACTGAGTTGTATGCGTCACCCAAATTTGGTGCTTCTTTTAGGAGCGTGTCCAGAGTATGGTATATTGGTTTATGAGTATATGGCAAATGGAAGCTTAGATGAATGTCTGACTCGAAAAAAGAAGGATAGGGTTCTGTGTTGGCAGTTGAGGTTCCGGATTGCTGCAGAGATAGCGACAGGCTTGCTATTCCTGCATCAGACCAAACCTGAACCTCTGGTGCATCGTGATTTGAAACCCGGAAACATTTTACTGGACCAGAATTATGTATGTAAGATTAGTGATGTTGGATTGGCAAGACTAGTCCCTGCAGTGGCTGATAACGTAACACAGTGTCGCATGACATCGGCAGCAGGAACATTCTGTTATATTGATCCTGAGTATCAGCAAACAGGAATGCTTGGAGTGAAGTCAGATGTTTATTCTCTAGGGATCATATTTCTACAGTTATTGACTGGCAGACATCCAATGGGTTTGGCTCACCATTCAGAGCAGGCGATTGAGAACGGGACATTTGAGGACATGCTTGACCCATGTGTCTCTAACTGGCCTGTTGAACAAGCCGTCTCCCTTGGGACTATAGCGGTGGAGTGCGCACAACTGAGGCGAAAGGATCGGCCAGATCTTGCAAAAGAAGTGATGCCTAAGCTTGTTAAACTTAGAGAGTTTGCTGATGAAAATATGGGTCCCATATTTTTAGGAGGAGGAGGCATGACTTGTATTAATGATGCAACTTCTCCGGATCATAGTGAAGCTTCTGTGCAGCAGGAGGTGATGAGCGACCCTCAGTTATTAGTAAATTCAGGAAGCTCAACTCCACCACCAACTCCTCCATCTCCAACAATAGAAGAAAATCCTTAG 2463 0.4312 MRAVLCGRKKQKHSMWVHHHNHHNHAKPASAIKKGAGNGLVAVAIDKDKGSQYALKWAADTLLTRGQTVILLHVSHPSSSSSSRGNEDAIVCNVNSAASASPQRNQIDNATRDLFLTFHCYCTRKDINCLDVLLEDNDVVKAVTEYVAYAAIENLVVGAPSRHGFIRPPFLCRFKTSTTPSSISKGAPDFCTVYVLSKGKPSSVRTASRQAPHTSPLLVHINKHFNNHDINQPAEQICSRRMNLRDRPSMKPHGWQDESMKSTFGRAGRGTSGMICMDFTESDTDISFVSSGRPSSACSSSIYDYMDSARTSRVSTSSDRSFGSNRLGLKFNDPGSPDTSFSLESGRTSCSSHTLDDAEADMRRLKLELKQTMDMYSTACREALTAQHKLMEMSHWKMEEEKKLEQAELAQEAALAIAEREKARSKAAMEAAEAARKIANVELKRRSTVEVKACKETEELRKLLDNLGQTDVRYRRYSIEEIEVATHMFSEKQIIGEGGYGPVYKCYLDHTPVAVKVLRPDAAQGKSQFQQEVDILSCMRHPNLVLLLGACPEYGILVYEYMANGSLDECLTRKKKDRVLCWQLRFRIAAEIATGLLFLHQTKPEPLVHRDLKPGNILLDQNYVCKISDVGLARLVPAVADNVTQCRMTSAAGTFCYIDPEYQQTGMLGVKSDVYSLGIIFLQLLTGRHPMGLAHHSEQAIENGTFEDMLDPCVSNWPVEQAVSLGTIAVECAQLRRKDRPDLAKEVMPKLVKLREFADENMGPIFLGGGGMTCINDATSPDHSEASVQQEVMSDPQLLVNSGSSTPPPTPPSPTIEENP 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07512 820 Pfam Protein kinase domain 489 741 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g07512 820 MobiDBLite consensus disorder prediction 328 347 - -
Vivi2g07512 820 ProSiteProfiles Protein kinase domain profile. 489 751 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g07512 820 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 462 561 - -
Vivi2g07512 820 Gene3D Transferase(Phosphotransferase) domain 1 562 763 - -
Vivi2g07512 820 MobiDBLite consensus disorder prediction 246 267 - -
Vivi2g07512 820 Coils Coil 355 375 - -
Vivi2g07512 820 MobiDBLite consensus disorder prediction 777 820 - -
Vivi2g07512 820 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 41 167 - -
Vivi2g07512 820 SUPERFAMILY Protein kinase-like (PK-like) 472 743 IPR011009 -
Vivi2g07512 820 Coils Coil 415 435 - -
Vivi2g07512 820 PANTHER OS02G0152300 PROTEIN 41 798 - -
Vivi2g07512 820 SMART serkin_6 489 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g07512 820 Pfam Universal stress protein family 41 164 IPR006016 -
Vivi2g07512 820 FunFam Os07g0541700 protein 562 654 - -
Vivi2g07512 820 Gene3D Phosphorylase Kinase; domain 1 461 561 - -
Vivi2g07512 820 MobiDBLite consensus disorder prediction 805 820 - -
Vivi2g07512 820 CDD STK_N 40 199 - -
Vivi2g07512 820 Gene3D HUPs 16 171 IPR014729 -
Vivi2g07512 820 MobiDBLite consensus disorder prediction 777 804 - -
Vivi2g07512 820 ProSitePatterns Serine/Threonine protein kinases active-site signature. 607 619 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07512 Vivi-Chr2 219991437 219995098 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g07512 29 797 Receptor kinase-like Gene Family AT1G78940 55.443 0.0 816
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Vivi2g07512 Pkinase 2.4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07512 - - gmx:100801601 998.038