Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07481 ATGTCATGTATATCTAATTCACTGTCTCTCTGTCTCTCAAACGAACCCACCTTCCCCTCTCTATCCAACTCAAGACAGAATATGGATTCTACCGAAGAACCCAAACTCAACCTCAACAACCTGAAAGCACTCAAAATCCTAGGTAAAGGAGCAATGGGAACGGTTTTCTTAATTCAACAAAACAACTCCTTCATGGCACTCAAAGTAGTTGATAAAACCTCAACTCACGACGCGGAGCGTCGAGCCCGTTGGGAAACCCAAGTCTTATCAAATTTAGCCCATCCATTTCTCCCTTCCCTCCTGGGCTCTTTCGAAACAGATCAGTTATTAGCCTGGTCTGTTCCGTATTGCCCAGGAGGCGATCTCAACGCCCTCCGCTACCACCAAACTGATCGCGTGTTCTCCACAACCGTGATCCGTTTCTACATAGCAGAGATTCTCTGCGCTCTCGACCACCTTCATACCATGGGCATCGCTTATCGTGACCTTAAACCAGAAAACGTTCTCATTCAACAATCTGGCCACGTCACGTTAACCGATTTCGATCTCTCACGTAAACTCTCTCCCAAAACGGTTAAAATCAAAACTCTCATTTCACTCGATAACAGAATCCATGAATCTCGCCGCAAATTACGGAAATGGAGAGTCCCAGAGGCTAACGGGAAGATAGCCAGAGTTACACCGGAGGTTCGACGGGAGCTCAGTTTCTCCGACGGTGAACGGTCTAATTCATTTGTCGGCACGACGGAATACGTCGCGCCGGAGGTTGTTCGCGGCGACGGACATGAGTTCGCGGTTGATTTTTGGGCGCTTGGAGTTTTGACCTACGAGATGATGTACGGAAAAACGCCGTTCAAGGGGAAGAACAAGAAGGAAACGTTTAGGAACGTGCTTTTCAAGTCGCCGGAGTTTGTTGGAAGGAAAACGGCGTTAACGGATCTCATCGAACGGTTGCTTGAGAAGGATCCTGTGAAGAGATTAGGTTATGTTGGTGGTGCTAGTGAGATAAAGGAGCATGAGTTTTTCAGAGGAGTTAAGTGGGAGATGTTGACGGAAGTTGTTCGGCCGCCGTTTATTCCGTCGAGAGATGAAAGTTATTTCACGGCGGATAGATTTGCAGAGGGAGTAAATATAAAGGAATACTTTGAAAAGATGAAGTCTCCGCCGTCGTTGCCGGTTTCGCCGTTACGGTCACCGTCGTCTGAGTTTCAGAATAGTGTTTCTTTTGCAGAGTTCTGA 1239 0.473 MSCISNSLSLCLSNEPTFPSLSNSRQNMDSTEEPKLNLNNLKALKILGKGAMGTVFLIQQNNSFMALKVVDKTSTHDAERRARWETQVLSNLAHPFLPSLLGSFETDQLLAWSVPYCPGGDLNALRYHQTDRVFSTTVIRFYIAEILCALDHLHTMGIAYRDLKPENVLIQQSGHVTLTDFDLSRKLSPKTVKIKTLISLDNRIHESRRKLRKWRVPEANGKIARVTPEVRRELSFSDGERSNSFVGTTEYVAPEVVRGDGHEFAVDFWALGVLTYEMMYGKTPFKGKNKKETFRNVLFKSPEFVGRKTALTDLIERLLEKDPVKRLGYVGGASEIKEHEFFRGVKWEMLTEVVRPPFIPSRDESYFTADRFAEGVNIKEYFEKMKSPPSLPVSPLRSPSSEFQNSVSFAEF 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07481 412 ProSitePatterns Protein kinases ATP-binding region signature. 47 68 IPR017441 GO:0005524
Vivi2g07481 412 MobiDBLite consensus disorder prediction 396 412 - -
Vivi2g07481 412 MobiDBLite consensus disorder prediction 387 412 - -
Vivi2g07481 412 SUPERFAMILY Protein kinase-like (PK-like) 38 402 IPR011009 -
Vivi2g07481 412 ProSiteProfiles Protein kinase domain profile. 41 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g07481 412 Gene3D Transferase(Phosphotransferase) domain 1 121 191 - -
Vivi2g07481 412 Pfam Protein kinase domain 43 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g07481 412 Gene3D Transferase(Phosphotransferase) domain 1 240 361 - -
Vivi2g07481 412 Gene3D Phosphorylase Kinase; domain 1 41 120 - -
Vivi2g07481 412 PANTHER FLIPPASE KINASE 1-RELATED 26 363 - -
Vivi2g07481 412 ProSitePatterns Serine/Threonine protein kinases active-site signature. 158 170 IPR008271 GO:0004672|GO:0006468
Vivi2g07481 412 ProSiteProfiles AGC-kinase C-terminal domain profile. 343 412 IPR000961 GO:0004674|GO:0005524|GO:0006468
Vivi2g07481 412 FunFam Serine/threonine-protein kinase OXI1 121 189 - -
Vivi2g07481 412 FunFam Serine/threonine-protein kinase OXI1 240 361 - -
Vivi2g07481 412 SMART serkin_6 41 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07481 Vivi-Chr2 219498589 219500063 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g07481 36 393 AGC Kinase Gene Family AT1G51170 60.477 2.03e-155 443
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Vivi2g07481 Pkinase 3.4e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07481 - K08286 gmx:100785281 494.967